Analysis of Ligand-Protein Contacts in PDB entry:
6RTI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 53 ligands in PDB entry 6RTI. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CFZ
X
5 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 2
CFZ
X
6 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 3
CFZ
X
15 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 4
CFZ
X
16 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 5
UFT
X
17 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 6
CFZ
X
20 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 7
UFT
X
21 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 8
UFT
X
22 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 9
CFZ
X
23 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 10
UFT
X
24 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 11
UFT
X
26 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 12
CFZ
X
28 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 13
UFT
X
29 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 14
UFT
X
33 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 15
CFZ
X
34 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 16
UFT
X
35 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 17
CFZ
X
37 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 18
UFT
X
39 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 19
UFT
X
40 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 20
CFZ
X
41 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 21
CFZ
X
42 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 22
CFZ
X
43 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 23
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 26
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 31
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 36
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 37
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 40
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
ZN
A
901 1ZINC ION
lig 43
ZN
A
902 1ZINC ION
lig 44
CL
A
903 1CHLORIDE ION
lig 45
CA
A
904 1CALCIUM ION
lig 46
G88
A
905 14(2S)-2-(PHOSPHONOMETHYL)PENTANEDIOIC ACID
lig 47
MPD
A
925 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 48
MPD
A
926 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 49
MPD
A
927 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 50
ACT
A
928 4ACETATE ION
lig 51
MPD
X
101 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 52
MPD
X
102 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 53
MPD
X
103 8(4S)-2-METHYL-2,4-PENTANEDIOL