Analysis of Ligand-Protein Contacts in PDB entry:
6SW9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 90 ligands in PDB entry 6SW9. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
4AC
2
17 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 2
4AC
2
53 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 3
LHH
2
250 24 OXOLAN-2-YL]METHYL DIHYDROGEN PHOSPHATE
lig 4
4AC
2
286 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 5
4AC
2
303 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 6
4AC
2
319 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 7
A2M
2
373 232'-O-METHYLADENOSINE 5'-(DIHYDROGEN PHOSPH
lig 8
4AC
2
379 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 9
4AC
2
394 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 10
4AC
2
479 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 11
4AC
2
511 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 12
4AC
2
546 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 13
4AC
2
590 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 14
4AC
2
626 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 15
4AC
2
636 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 16
4AC
2
648 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 17
4AC
2
703 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 18
4AC
2
718 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 19
4AC
2
731 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 20
4AC
2
751 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 21
4AC
2
828 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 22
4AC
2
839 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 23
4AC
2
848 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 24
4AC
2
851 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 25
4AC
2
868 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 26
B8H
2
938 21 OXOLAN-2-YL]METHYL DIHYDROGEN PHOSPHATE
lig 27
5MC
2
939 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 28
4AC
2
957 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 29
4AC
2
1028 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 30
4AC
2
1041 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 31
4AC
2
1147 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 32
4AC
2
1184 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 33
4AC
2
1193 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 34
5MC
2
1202 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 35
4AC
2
1233 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 36
4AC
2
1239 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 37
OMC
2
1376 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 38
5HM
2
1378 225-(HYDROXYMETHYL)CYTIDINE 5'-(DIHYDROGEN P
lig 39
UR3
2
1467 213-METHYLURIDINE-5'-MONOPHOSHATE
lig 40
6MZ
2
1469 23N6-METHYLADENOSINE-5'-MONOPHOSPHATE
lig 41
4AC
2
1479 23N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
lig 42
MA6
2
1487 246N-DIMETHYLADENOSINE-5'-MONOPHOSHATE
lig 43
MA6
2
1488 246N-DIMETHYLADENOSINE-5'-MONOPHOSHATE
lig 44
4SU
4
8 204-THIOURIDINE-5'-MONOPHOSPHATE
lig 45
H2U
4
20 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 46
OMC
4
32 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 47
5MU
4
54 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 48
PSU
4
55 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 49
MG
2
1601 1MAGNESIUM ION
lig 50
MG
2
1602 1MAGNESIUM ION
lig 51
MG
2
1603 1MAGNESIUM ION
lig 52
MG
2
1604 1MAGNESIUM ION
lig 53
MG
2
1605 1MAGNESIUM ION
lig 54
MG
2
1606 1MAGNESIUM ION
lig 55
MG
2
1607 1MAGNESIUM ION
lig 56
MG
2
1608 1MAGNESIUM ION
lig 57
MG
2
1609 1MAGNESIUM ION
lig 58
MG
2
1610 1MAGNESIUM ION
lig 59
MG
2
1611 1MAGNESIUM ION
lig 60
MG
2
1612 1MAGNESIUM ION
lig 61
MG
2
1613 1MAGNESIUM ION
lig 62
MG
2
1614 1MAGNESIUM ION
lig 63
MG
2
1615 1MAGNESIUM ION
lig 64
MG
2
1616 1MAGNESIUM ION
lig 65
MG
2
1617 1MAGNESIUM ION
lig 66
MG
2
1618 1MAGNESIUM ION
lig 67
MG
2
1619 1MAGNESIUM ION
lig 68
MG
2
1620 1MAGNESIUM ION
lig 69
MG
2
1621 1MAGNESIUM ION
lig 70
MG
2
1622 1MAGNESIUM ION
lig 71
MG
2
1623 1MAGNESIUM ION
lig 72
MG
2
1624 1MAGNESIUM ION
lig 73
MG
2
1625 1MAGNESIUM ION
lig 74
MG
2
1626 1MAGNESIUM ION
lig 75
MG
2
1627 1MAGNESIUM ION
lig 76
MG
2
1628 1MAGNESIUM ION
lig 77
MG
2
1629 1MAGNESIUM ION
lig 78
MG
2
1630 1MAGNESIUM ION
lig 79
MG
2
1631 1MAGNESIUM ION
lig 80
ZN
C
101 1ZINC ION
lig 81
ZN
C
102 1ZINC ION
lig 82
ZN
F
301 1ZINC ION
lig 83
ZN
P
101 1ZINC ION
lig 84
ZN
R
201 1ZINC ION
lig 85
ZN
W
101 1ZINC ION
lig 86
MG
5
901 1MAGNESIUM ION
lig 87
MG
4
101 1MAGNESIUM ION
lig 88
MET
7
501 8METHIONINE
lig 89
GNP
7
502 32PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTE
lig 90
MG
7
503 1MAGNESIUM ION