Analysis of Ligand-Protein Contacts in PDB entry:
6TRA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 136 ligands in PDB entry 6TRA. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
FME
I
1 10N-FORMYLMETHIONINE
lig 2
FME
J
1 10N-FORMYLMETHIONINE
lig 3
CL0
A
801 65CHLOROPHYLL A ISOMER
lig 4
CLA
A
802 65CHLOROPHYLL A
lig 5
CLA
A
803 65CHLOROPHYLL A
lig 6
CLA
A
804 65CHLOROPHYLL A
lig 7
CLA
A
805 59CHLOROPHYLL A
lig 8
CLA
A
806 65CHLOROPHYLL A
lig 9
CLA
A
807 65CHLOROPHYLL A
lig 10
CLA
A
808 51CHLOROPHYLL A
lig 11
CLA
A
809 65CHLOROPHYLL A
lig 12
CLA
A
810 65CHLOROPHYLL A
lig 13
CLA
A
811 49CHLOROPHYLL A
lig 14
CLA
A
812 65CHLOROPHYLL A
lig 15
CLA
A
813 45CHLOROPHYLL A
lig 16
CLA
A
814 65CHLOROPHYLL A
lig 17
CLA
A
815 65CHLOROPHYLL A
lig 18
CLA
A
816 65CHLOROPHYLL A
lig 19
CLA
A
817 65CHLOROPHYLL A
lig 20
CLA
A
818 65CHLOROPHYLL A
lig 21
CLA
A
819 65CHLOROPHYLL A
lig 22
CLA
A
820 65CHLOROPHYLL A
lig 23
CLA
A
821 65CHLOROPHYLL A
lig 24
CLA
A
822 65CHLOROPHYLL A
lig 25
CLA
A
823 45CHLOROPHYLL A
lig 26
CLA
A
824 65CHLOROPHYLL A
lig 27
CLA
A
825 65CHLOROPHYLL A
lig 28
CLA
A
826 65CHLOROPHYLL A
lig 29
CLA
A
827 65CHLOROPHYLL A
lig 30
CLA
A
828 65CHLOROPHYLL A
lig 31
CLA
A
829 65CHLOROPHYLL A
lig 32
CLA
A
830 65CHLOROPHYLL A
lig 33
CLA
A
831 65CHLOROPHYLL A
lig 34
CLA
A
832 60CHLOROPHYLL A
lig 35
CLA
A
833 65CHLOROPHYLL A
lig 36
CLA
A
834 65CHLOROPHYLL A
lig 37
CLA
A
835 65CHLOROPHYLL A
lig 38
CLA
A
836 65CHLOROPHYLL A
lig 39
CLA
A
837 45CHLOROPHYLL A
lig 40
CLA
A
838 65CHLOROPHYLL A
lig 41
CLA
A
839 65CHLOROPHYLL A
lig 42
CLA
A
840 65CHLOROPHYLL A
lig 43
CLA
A
841 65CHLOROPHYLL A
lig 44
CLA
A
842 65CHLOROPHYLL A
lig 45
CLA
A
843 45CHLOROPHYLL A
lig 46
PQN
A
844 33PHYLLOQUINONE
lig 47
BCR
A
845 40BETA-CAROTENE
lig 48
BCR
A
846 40BETA-CAROTENE
lig 49
BCR
A
847 40BETA-CAROTENE
lig 50
BCR
A
848 40BETA-CAROTENE
lig 51
BCR
A
849 40BETA-CAROTENE
lig 52
BCR
A
850 40BETA-CAROTENE
lig 53
BCR
A
851 25BETA-CAROTENE
lig 54
LHG
A
852 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 55
LHG
A
853 411,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 56
CLA
A
854 65CHLOROPHYLL A
lig 57
CLA
B
801 65CHLOROPHYLL A
lig 58
SF4
B
802 8IRON/SULFUR CLUSTER
lig 59
CA
B
803 1CALCIUM ION
lig 60
CLA
B
804 65CHLOROPHYLL A
lig 61
CLA
B
805 65CHLOROPHYLL A
lig 62
CLA
B
806 65CHLOROPHYLL A
lig 63
CLA
B
807 65CHLOROPHYLL A
lig 64
CLA
B
808 65CHLOROPHYLL A
lig 65
CLA
B
809 65CHLOROPHYLL A
lig 66
CLA
B
810 65CHLOROPHYLL A
lig 67
CLA
B
811 65CHLOROPHYLL A
lig 68
CLA
B
812 65CHLOROPHYLL A
lig 69
CLA
B
813 45CHLOROPHYLL A
lig 70
CLA
B
814 65CHLOROPHYLL A
lig 71
CLA
B
815 65CHLOROPHYLL A
lig 72
CLA
B
816 65CHLOROPHYLL A
lig 73
CLA
B
817 65CHLOROPHYLL A
lig 74
CLA
B
818 65CHLOROPHYLL A
lig 75
CLA
B
819 65CHLOROPHYLL A
lig 76
CLA
B
820 65CHLOROPHYLL A
lig 77
CLA
B
821 65CHLOROPHYLL A
lig 78
CLA
B
822 45CHLOROPHYLL A
lig 79
CLA
B
823 55CHLOROPHYLL A
lig 80
CLA
B
824 45CHLOROPHYLL A
lig 81
CLA
B
825 65CHLOROPHYLL A
lig 82
CLA
B
826 65CHLOROPHYLL A
lig 83
CLA
B
827 65CHLOROPHYLL A
lig 84
CLA
B
828 65CHLOROPHYLL A
lig 85
CLA
B
829 65CHLOROPHYLL A
lig 86
CLA
B
830 65CHLOROPHYLL A
lig 87
CLA
B
831 55CHLOROPHYLL A
lig 88
CLA
B
832 49CHLOROPHYLL A
lig 89
CLA
B
833 65CHLOROPHYLL A
lig 90
CLA
B
834 65CHLOROPHYLL A
lig 91
CLA
B
835 65CHLOROPHYLL A
lig 92
CLA
B
836 50CHLOROPHYLL A
lig 93
CLA
B
837 45CHLOROPHYLL A
lig 94
CLA
B
838 60CHLOROPHYLL A
lig 95
CLA
B
839 65CHLOROPHYLL A
lig 96
CLA
B
840 47CHLOROPHYLL A
lig 97
CLA
B
841 65CHLOROPHYLL A
lig 98
CLA
B
842 65CHLOROPHYLL A
lig 99
PQN
B
843 33PHYLLOQUINONE
lig 100
BCR
B
844 40BETA-CAROTENE
lig 101
BCR
B
845 40BETA-CAROTENE
lig 102
BCR
B
846 40BETA-CAROTENE
lig 103
BCR
B
847 40BETA-CAROTENE
lig 104
BCR
B
848 40BETA-CAROTENE
lig 105
BCR
B
849 40BETA-CAROTENE
lig 106
LMG
B
850 551,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
lig 107
LHG
B
851 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 108
BCR
B
852 40BETA-CAROTENE
lig 109
BCR
B
853 40BETA-CAROTENE
lig 110
SF4
C
101 8IRON/SULFUR CLUSTER
lig 111
SF4
C
102 8IRON/SULFUR CLUSTER
lig 112
CLA
F
201 58CHLOROPHYLL A
lig 113
BCR
F
202 40BETA-CAROTENE
lig 114
CLA
F
203 45CHLOROPHYLL A
lig 115
CLA
F
204 50CHLOROPHYLL A
lig 116
BCR
F
205 40BETA-CAROTENE
lig 117
BCR
I
101 40BETA-CAROTENE
lig 118
LHG
I
102 391,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 119
BCR
I
103 40BETA-CAROTENE
lig 120
CLA
J
101 45CHLOROPHYLL A
lig 121
CLA
J
102 37CHLOROPHYLL A
lig 122
BCR
J
103 40BETA-CAROTENE
lig 123
BCR
J
104 40BETA-CAROTENE
lig 124
CLA
K
101 46CHLOROPHYLL A
lig 125
CLA
K
102 58CHLOROPHYLL A
lig 126
BCR
K
103 25BETA-CAROTENE
lig 127
CLA
L
201 65CHLOROPHYLL A
lig 128
BCR
L
202 40BETA-CAROTENE
lig 129
CA
L
203 1CALCIUM ION
lig 130
CLA
L
204 65CHLOROPHYLL A
lig 131
CLA
L
205 65CHLOROPHYLL A
lig 132
CLA
L
206 65CHLOROPHYLL A
lig 133
BCR
L
207 40BETA-CAROTENE
lig 134
LHG
M
101 491,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
lig 135
CLA
M
102 36CHLOROPHYLL A
lig 136
CLA
X
1701 45CHLOROPHYLL A