Analysis of Ligand-Protein Contacts in PDB entry:
6VF4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 6VF4. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MN
A
501 1MANGANESE (II) ION
lig 2
MN
A
502 1MANGANESE (II) ION
lig 3
MN
A
503 1MANGANESE (II) ION
lig 4
MN
A
504 1MANGANESE (II) ION
lig 5
NA
A
505 1SODIUM ION
lig 6
DTT
A
507 12,3-DIHYDROXY-1,4-DITHIOBUTANE
lig 7
EPE
A
508 44-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 8
EDO
A
509 31,2-ETHANEDIOL
lig 9
EDO
A
510 41,2-ETHANEDIOL
lig 10
8GT
A
511 338-OXO-GUANOSINE-5'-TRIPHOSPHATE
lig 11
MN
T
101 1MANGANESE (II) ION
lig 12
EDO
P
101 41,2-ETHANEDIOL