Analysis of Ligand-Protein Contacts in PDB entry:
6VF5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 6VF5. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
8GM
P
5 24 DIHYDROGEN PHOSPHATE
lig 2
MN
A
501 1MANGANESE (II) ION
lig 3
MN
A
502 1MANGANESE (II) ION
lig 4
MN
A
503 1MANGANESE (II) ION
lig 5
MN
A
504 1MANGANESE (II) ION
lig 6
MN
A
505 1MANGANESE (II) ION
lig 7
NA
A
506 1SODIUM ION
lig 8
DTT
A
508 12,3-DIHYDROXY-1,4-DITHIOBUTANE
lig 9
EPE
A
509 54-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 10
EDO
A
510 41,2-ETHANEDIOL
lig 11
EDO
A
511 41,2-ETHANEDIOL
lig 12
EDO
A
512 41,2-ETHANEDIOL
lig 13
OXL
A
513 6OXALATE ION
lig 14
MN
T
101 1MANGANESE (II) ION
lig 15
MN
D
101 1MANGANESE (II) ION