Analysis of Ligand-Protein Contacts in PDB entry:
6VND


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 6VND. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
R4P
A
401 26 BENZOTRIAZOLE-7-CARBOXYLIC ACID
lig 2
DET
A
402 15UNDECYLAMINE-N,N-DIMETHYL-N-OXIDE
lig 3
DET
A
403 15UNDECYLAMINE-N,N-DIMETHYL-N-OXIDE
lig 4
DDQ
A
404 14DECYLAMINE-N,N-DIMETHYL-N-OXIDE
lig 5
DDQ
A
405 14DECYLAMINE-N,N-DIMETHYL-N-OXIDE
lig 6
CL
A
406 1CHLORIDE ION
lig 7
NA
A
407 1SODIUM ION
lig 8
NA
A
408 1SODIUM ION
lig 9
NA
A
409 1SODIUM ION
lig 10
FMN
A
410 31FLAVIN MONONUCLEOTIDE
lig 11
ORO
A
411 11OROTIC ACID
lig 12
ACT
A
412 4ACETATE ION
lig 13
ACT
A
413 4ACETATE ION
lig 14
ACT
A
414 4ACETATE ION
lig 15
GOL
A
415 6GLYCEROL
lig 16
GOL
A
416 6GLYCEROL
lig 17
GOL
A
417 6GLYCEROL
lig 18
GOL
A
418 6GLYCEROL
lig 19
GOL
A
419 6GLYCEROL
lig 20
GOL
A
420 6GLYCEROL