Analysis of Ligand-Protein Contacts in PDB entry:
6VNP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 6VNP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
A38
T
6 228-OXY DEOXYADENOSINE-5'-MONOPHOSPHATE
lig 2
A38
C
6 228-OXY DEOXYADENOSINE-5'-MONOPHOSPHATE
lig 3
A38
F
6 228-OXY DEOXYADENOSINE-5'-MONOPHOSPHATE
lig 4
A38
I
6 228-OXY DEOXYADENOSINE-5'-MONOPHOSPHATE
lig 5
DZ4
A
401 30 PHOSPHORYL]AMINO}PHOSPHORYL]ADENOSINE
lig 6
MG
A
402 1MAGNESIUM ION
lig 7
MG
A
403 1MAGNESIUM ION
lig 8
DZ4
D
401 30 PHOSPHORYL]AMINO}PHOSPHORYL]ADENOSINE
lig 9
MG
D
402 1MAGNESIUM ION
lig 10
MG
D
403 1MAGNESIUM ION
lig 11
DZ4
G
401 30 PHOSPHORYL]AMINO}PHOSPHORYL]ADENOSINE
lig 12
MG
G
402 1MAGNESIUM ION
lig 13
MG
G
403 1MAGNESIUM ION
lig 14
DZ4
J
401 30 PHOSPHORYL]AMINO}PHOSPHORYL]ADENOSINE
lig 15
MG
J
402 1MAGNESIUM ION
lig 16
MG
J
403 1MAGNESIUM ION