Analysis of Ligand-Protein Contacts in PDB entry:
6VQL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 24 ligands in PDB entry 6VQL. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
345 11PHOSPHOTHREONINE
lig 2
SEP
A
346 10PHOSPHOSERINE
lig 3
TPO
B
345 11PHOSPHOTHREONINE
lig 4
SEP
B
346 10PHOSPHOSERINE
lig 5
TPO
C
342 11PHOSPHOTHREONINE
lig 6
TPO
C
345 11PHOSPHOTHREONINE
lig 7
SEP
C
346 10PHOSPHOSERINE
lig 8
TPO
D
342 11PHOSPHOTHREONINE
lig 9
TPO
D
345 11PHOSPHOTHREONINE
lig 10
SEP
D
346 10PHOSPHOSERINE
lig 11
R7S
A
501 30 CARBOXAMIDE
lig 12
SO4
A
502 5SULFATE ION
lig 13
R7S
B
501 30 CARBOXAMIDE
lig 14
SO4
B
502 5SULFATE ION
lig 15
SO4
B
503 5SULFATE ION
lig 16
SO4
B
504 5SULFATE ION
lig 17
SO4
B
505 5SULFATE ION
lig 18
R7S
C
501 30 CARBOXAMIDE
lig 19
SO4
C
502 5SULFATE ION
lig 20
SO4
C
503 5SULFATE ION
lig 21
SO4
C
504 5SULFATE ION
lig 22
R7S
D
501 30 CARBOXAMIDE
lig 23
SO4
D
502 5SULFATE ION
lig 24
SO4
D
503 5SULFATE ION