Analysis of Ligand-Protein Contacts in PDB entry:
6VTT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 104 ligands in PDB entry 6VTT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TYS
H
100 32O-SULFO-L-TYROSINE
lig 2
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 11
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 18
MAN
O
4 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
O
5 11ALPHA-D-MANNOPYRANOSE
lig 20
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
BMA
T
3 11BETA-D-MANNOPYRANOSE
lig 31
MAN
T
4 11ALPHA-D-MANNOPYRANOSE
lig 32
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
BMA
V
3 11BETA-D-MANNOPYRANOSE
lig 37
MAN
V
4 11ALPHA-D-MANNOPYRANOSE
lig 38
MAN
V
5 11ALPHA-D-MANNOPYRANOSE
lig 39
MAN
V
6 11ALPHA-D-MANNOPYRANOSE
lig 40
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
BMA
W
3 11BETA-D-MANNOPYRANOSE
lig 43
MAN
W
4 11ALPHA-D-MANNOPYRANOSE
lig 44
MAN
W
5 11ALPHA-D-MANNOPYRANOSE
lig 45
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
BMA
X
3 11BETA-D-MANNOPYRANOSE
lig 48
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
NAG
Y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
a
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
NAG
a
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
BMA
b
3 11BETA-D-MANNOPYRANOSE
lig 57
MAN
b
4 11ALPHA-D-MANNOPYRANOSE
lig 58
MAN
b
5 11ALPHA-D-MANNOPYRANOSE
lig 59
MAN
b
6 11ALPHA-D-MANNOPYRANOSE
lig 60
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 62
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 64
NAG
F
1088 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 65
NAG
F
1234 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 66
NAG
F
1289 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 67
NAG
F
1301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
NAG
F
1356 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 69
NAG
F
1362 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
NAG
F
1386 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
NAG
F
1442 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 72
NAG
F
1448 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 73
NAG
F
1502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 74
NAG
E
1088 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 75
NAG
E
1130 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 76
NAG
E
1156 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 77
NAG
E
1160 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 78
NAG
E
1230 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 79
NAG
E
1241 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 80
NAG
E
1276 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 81
NAG
E
1289 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 82
NAG
E
1301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 83
NAG
E
1332 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 84
NAG
E
1356 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 85
NAG
E
1362 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 86
NAG
E
1442 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 87
NAG
E
1443 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 88
NAG
E
1502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 89
NAG
G
1088 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 90
NAG
G
1234 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 91
NAG
G
1276 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 92
NAG
G
1301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 93
NAG
G
1356 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 94
NAG
G
1362 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 95
NAG
G
1386 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 96
NAG
G
1442 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 97
NAG
G
1448 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 98
NAG
G
1502 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 99
NAG
A
1611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 100
NAG
A
1637 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 101
NAG
B
1611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 102
NAG
B
1637 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 103
NAG
C
1611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 104
NAG
C
1637 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE