Analysis of Ligand-Protein Contacts in PDB entry:
6Y0U


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 6Y0U. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
O65
E
102 113,5-BIS(HYDROXYMETHYL)-4-METHYL-BENZALDEHY
lig 2
DLY
E
103 9D-LYSINE
lig 3
DLY
E
104 5D-LYSINE
lig 4
DLY
E
107 5D-LYSINE
lig 5
DLY
E
110 6D-LYSINE
lig 6
NH2
E
115 1AMINO GROUP
lig 7
O65
F
102 113,5-BIS(HYDROXYMETHYL)-4-METHYL-BENZALDEHY
lig 8
DLY
F
103 5D-LYSINE
lig 9
DLY
F
104 5D-LYSINE
lig 10
DLY
F
107 5D-LYSINE
lig 11
DLY
F
110 9D-LYSINE
lig 12
NH2
F
115 1AMINO GROUP
lig 13
O65
H
102 113,5-BIS(HYDROXYMETHYL)-4-METHYL-BENZALDEHY
lig 14
DLY
H
103 9D-LYSINE
lig 15
DLY
H
104 5D-LYSINE
lig 16
DLY
H
107 5D-LYSINE
lig 17
DLY
H
110 6D-LYSINE
lig 18
NH2
H
115 1AMINO GROUP
lig 19
CA
A
301 1CALCIUM ION
lig 20
CA
A
302 1CALCIUM ION
lig 21
ZDC
E
201 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-
lig 22
CA
B
301 1CALCIUM ION
lig 23
CA
B
302 1CALCIUM ION
lig 24
ZDC
F
201 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-
lig 25
CA
C
301 1CALCIUM ION
lig 26
CA
C
302 1CALCIUM ION
lig 27
ZDC
C
303 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-
lig 28
CA
D
301 1CALCIUM ION
lig 29
CA
D
302 1CALCIUM ION
lig 30
ZDC
H
201 133,7-ANHYDRO-2,8-DIDEOXY-L-GLYCERO-D-GLUCO-