Analysis of Ligand-Protein Contacts in PDB entry:
6Y9E


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 52 ligands in PDB entry 6Y9E. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CL
A
401 1CHLORIDE ION
lig 2
CL
A
402 1CHLORIDE ION
lig 3
MPD
A
403 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 4
TRS
A
404 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 5
TRS
A
405 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 6
TRS
A
406 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 7
TRS
A
407 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 8
EDO
A
408 41,2-ETHANEDIOL
lig 9
EDO
A
409 41,2-ETHANEDIOL
lig 10
EDO
A
410 41,2-ETHANEDIOL
lig 11
EDO
A
411 41,2-ETHANEDIOL
lig 12
EDO
A
412 41,2-ETHANEDIOL
lig 13
EDO
A
413 41,2-ETHANEDIOL
lig 14
EDO
A
414 41,2-ETHANEDIOL
lig 15
CL
B
401 1CHLORIDE ION
lig 16
CL
B
402 1CHLORIDE ION
lig 17
MPD
B
403 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 18
TRS
B
404 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 19
EDO
B
405 41,2-ETHANEDIOL
lig 20
EDO
B
406 41,2-ETHANEDIOL
lig 21
EDO
B
407 41,2-ETHANEDIOL
lig 22
EDO
B
408 41,2-ETHANEDIOL
lig 23
EDO
B
409 41,2-ETHANEDIOL
lig 24
EDO
B
410 41,2-ETHANEDIOL
lig 25
EDO
B
411 41,2-ETHANEDIOL
lig 26
CL
C
401 1CHLORIDE ION
lig 27
CL
C
402 1CHLORIDE ION
lig 28
MPD
C
403 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 29
MPD
C
404 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 30
EDO
C
405 41,2-ETHANEDIOL
lig 31
EDO
C
406 41,2-ETHANEDIOL
lig 32
EDO
C
407 41,2-ETHANEDIOL
lig 33
EDO
C
408 41,2-ETHANEDIOL
lig 34
EDO
C
409 41,2-ETHANEDIOL
lig 35
EDO
C
410 41,2-ETHANEDIOL
lig 36
EDO
C
411 41,2-ETHANEDIOL
lig 37
CL
D
401 1CHLORIDE ION
lig 38
CL
D
402 1CHLORIDE ION
lig 39
MPD
D
403 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 40
EDO
D
404 41,2-ETHANEDIOL
lig 41
EDO
D
405 41,2-ETHANEDIOL
lig 42
EDO
D
406 41,2-ETHANEDIOL
lig 43
CL
E
401 1CHLORIDE ION
lig 44
CL
E
402 1CHLORIDE ION
lig 45
EDO
E
403 41,2-ETHANEDIOL
lig 46
CL
F
401 1CHLORIDE ION
lig 47
CL
F
402 1CHLORIDE ION
lig 48
EDO
F
403 41,2-ETHANEDIOL
lig 49
EDO
F
404 41,2-ETHANEDIOL
lig 50
EDO
F
405 41,2-ETHANEDIOL
lig 51
EDO
F
406 41,2-ETHANEDIOL
lig 52
EDO
F
407 41,2-ETHANEDIOL