Analysis of Ligand-Protein Contacts in PDB entry:
6YED


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 6YED. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PGE
A
401 10TRIETHYLENE GLYCOL
lig 2
PEG
A
402 7DI(HYDROXYETHYL)ETHER
lig 3
PEG
A
403 7DI(HYDROXYETHYL)ETHER
lig 4
EDO
A
404 41,2-ETHANEDIOL
lig 5
EDO
A
405 41,2-ETHANEDIOL
lig 6
EDO
A
406 41,2-ETHANEDIOL
lig 7
EDO
A
407 41,2-ETHANEDIOL
lig 8
EDO
A
408 41,2-ETHANEDIOL
lig 9
EDO
A
409 41,2-ETHANEDIOL
lig 10
EDO
A
410 41,2-ETHANEDIOL
lig 11
EDO
A
411 41,2-ETHANEDIOL
lig 12
EDO
A
412 41,2-ETHANEDIOL
lig 13
EDO
A
413 41,2-ETHANEDIOL
lig 14
EDO
A
414 41,2-ETHANEDIOL
lig 15
CL
A
415 1CHLORIDE ION
lig 16
CL
A
416 1CHLORIDE ION
lig 17
PEG
B
401 7DI(HYDROXYETHYL)ETHER
lig 18
PEG
B
402 7DI(HYDROXYETHYL)ETHER
lig 19
PEG
B
403 7DI(HYDROXYETHYL)ETHER
lig 20
PEG
B
404 7DI(HYDROXYETHYL)ETHER
lig 21
EDO
B
405 41,2-ETHANEDIOL
lig 22
EDO
B
406 41,2-ETHANEDIOL
lig 23
EDO
B
407 41,2-ETHANEDIOL
lig 24
EDO
B
408 41,2-ETHANEDIOL
lig 25
CL
B
409 1CHLORIDE ION