Analysis of Ligand-Protein Contacts in PDB entry:
6YKA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 6YKA. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
EDO
A
401 41,2-ETHANEDIOL
lig 2
EDO
A
402 41,2-ETHANEDIOL
lig 3
EDO
A
403 41,2-ETHANEDIOL
lig 4
EDO
A
404 41,2-ETHANEDIOL
lig 5
PGE
A
405 10TRIETHYLENE GLYCOL
lig 6
EDO
A
406 41,2-ETHANEDIOL
lig 7
GOL
A
407 6GLYCEROL
lig 8
GOL
A
408 6GLYCEROL
lig 9
PGE
B
401 10TRIETHYLENE GLYCOL
lig 10
EDO
B
402 41,2-ETHANEDIOL
lig 11
FE9
B
403 41IRON-GUANYLYL PYRIDINOL COFACTOR
lig 12
GOL
B
404 6GLYCEROL