Analysis of Ligand-Protein Contacts in PDB entry:
6YOM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 6YOM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FE
A
701 1FE (III) ION
lig 2
MN
A
702 1MANGANESE (II) ION
lig 3
MG
A
703 1MAGNESIUM ION
lig 4
MG
A
704 1MAGNESIUM ION
lig 5
0KX
A
705 28 PHOSPHORYL]AMINO}PHOSPHORYL]CYTIDINE
lig 6
CZF
A
706 32 PHOSPHATE
lig 7
DTP
A
707 302'-DEOXYADENOSINE 5'-TRIPHOSPHATE
lig 8
DTP
B
701 302'-DEOXYADENOSINE 5'-TRIPHOSPHATE
lig 9
FE
B
702 1FE (III) ION
lig 10
MN
B
703 1MANGANESE (II) ION
lig 11
MG
B
704 1MAGNESIUM ION
lig 12
MG
B
705 1MAGNESIUM ION
lig 13
0KX
B
706 28 PHOSPHORYL]AMINO}PHOSPHORYL]CYTIDINE
lig 14
CZF
B
707 32 PHOSPHATE