Analysis of Ligand-Protein Contacts in PDB entry:
6YT4


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 64 ligands in PDB entry 6YT4. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OLC
A
301 12(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 2
OLA
A
302 17OLEIC ACID
lig 3
LFA
A
303 20EICOSANE
lig 4
OLA
A
304 16OLEIC ACID
lig 5
LFA
A
305 5EICOSANE
lig 6
LFA
A
306 8EICOSANE
lig 7
OLA
A
307 10OLEIC ACID
lig 8
OLA
A
308 13OLEIC ACID
lig 9
BOG
A
309 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 10
RET
A
310 20RETINAL
lig 11
OLA
A
311 5OLEIC ACID
lig 12
NA
A
312 1SODIUM ION
lig 13
OLC
B
301 13(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 14
LFA
B
302 19EICOSANE
lig 15
LFA
B
303 11EICOSANE
lig 16
LFA
B
304 20EICOSANE
lig 17
OLA
B
305 14OLEIC ACID
lig 18
LFA
B
306 6EICOSANE
lig 19
LFA
B
307 9EICOSANE
lig 20
OLA
B
308 4OLEIC ACID
lig 21
OLA
B
309 16OLEIC ACID
lig 22
BOG
B
310 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 23
RET
B
311 20RETINAL
lig 24
LFA
B
312 20EICOSANE
lig 25
OLA
B
313 12OLEIC ACID
lig 26
NA
B
314 1SODIUM ION
lig 27
LFA
D
401 20EICOSANE
lig 28
LFA
D
402 18EICOSANE
lig 29
LFA
D
403 10EICOSANE
lig 30
LFA
D
404 15EICOSANE
lig 31
OLC
D
405 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 32
OLA
D
406 4OLEIC ACID
lig 33
LFA
D
407 7EICOSANE
lig 34
BOG
D
408 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 35
OLA
D
409 20OLEIC ACID
lig 36
LFA
D
410 8EICOSANE
lig 37
LFA
D
411 7EICOSANE
lig 38
RET
D
412 20RETINAL
lig 39
NA
D
413 1SODIUM ION
lig 40
LFA
E
401 5EICOSANE
lig 41
LFA
E
402 20EICOSANE
lig 42
OLA
E
403 4OLEIC ACID
lig 43
OLC
E
404 10(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 44
OLA
E
405 20OLEIC ACID
lig 45
LFA
E
406 19EICOSANE
lig 46
OLA
E
407 12OLEIC ACID
lig 47
LFA
E
408 18EICOSANE
lig 48
LFA
E
409 5EICOSANE
lig 49
LFA
E
410 5EICOSANE
lig 50
OLA
E
411 18OLEIC ACID
lig 51
BOG
E
412 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 52
LFA
E
413 8EICOSANE
lig 53
RET
E
414 20RETINAL
lig 54
NA
E
415 1SODIUM ION
lig 55
OLA
C
1401 4OLEIC ACID
lig 56
OLC
C
1402 11(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 57
LFA
C
1403 16EICOSANE
lig 58
LFA
C
1404 15EICOSANE
lig 59
LFA
C
1405 3EICOSANE
lig 60
LFA
C
1406 6EICOSANE
lig 61
LFA
C
1407 5EICOSANE
lig 62
BOG
C
1408 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 63
RET
C
1409 20RETINAL
lig 64
NA
C
1410 1SODIUM ION