Analysis of Ligand-Protein Contacts in PDB entry:
6BCR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 20 ligands in PDB entry 6BCR. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
C
340 11PHOSPHOTHREONINE
lig 2
TPO
D
340 11PHOSPHOTHREONINE
lig 3
TPO
G
340 11PHOSPHOTHREONINE
lig 4
TPO
H
340 11PHOSPHOTHREONINE
lig 5
MG
A
300 1MAGNESIUM ION
lig 6
MG
A
301 1MAGNESIUM ION
lig 7
PEG
A
302 7DI(HYDROXYETHYL)ETHER
lig 8
PEG
A
303 7DI(HYDROXYETHYL)ETHER
lig 9
MG
B
301 1MAGNESIUM ION
lig 10
1PE
B
302 16PENTAETHYLENE GLYCOL
lig 11
EDO
B
303 41,2-ETHANEDIOL
lig 12
MG
E
300 1MAGNESIUM ION
lig 13
ETF
E
301 6TRIFLUOROETHANOL
lig 14
PEG
E
302 7DI(HYDROXYETHYL)ETHER
lig 15
PEG
E
303 7DI(HYDROXYETHYL)ETHER
lig 16
MG
F
300 1MAGNESIUM ION
lig 17
ETF
F
301 6TRIFLUOROETHANOL
lig 18
PEG
F
302 7DI(HYDROXYETHYL)ETHER
lig 19
1PE
F
303 16PENTAETHYLENE GLYCOL
lig 20
EDO
F
304 41,2-ETHANEDIOL