Analysis of Ligand-Protein Contacts in PDB entry:
6C5K


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 6C5K. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PCA
H
1 8PYROGLUTAMIC ACID
lig 2
PCA
A
1 8PYROGLUTAMIC ACID
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
FUC
C
3 10ALPHA-L-FUCOPYRANOSE
lig 6
GP1
D
1 162-AMINO-2-DEOXY-1-O-PHOSPHONO-ALPHA-D-GLUC
lig 7
Z9M
D
2 152-AMINO-2-DEOXY-4-O-PHOSPHONO-BETA-D-GLUCO
lig 8
KDO
D
3 153-DEOXY-ALPHA-D-MANNO-OCT-2-ULOPYRANOSONIC
lig 9
KDO
D
4 153-DEOXY-ALPHA-D-MANNO-OCT-2-ULOPYRANOSONIC
lig 10
KDO
D
5 153-DEOXY-ALPHA-D-MANNO-OCT-2-ULOPYRANOSONIC
lig 11
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
FUC
E
3 10ALPHA-L-FUCOPYRANOSE
lig 14
GP1
F
1 162-AMINO-2-DEOXY-1-O-PHOSPHONO-ALPHA-D-GLUC
lig 15
Z9M
F
2 152-AMINO-2-DEOXY-4-O-PHOSPHONO-BETA-D-GLUCO
lig 16
KDO
F
3 153-DEOXY-ALPHA-D-MANNO-OCT-2-ULOPYRANOSONIC
lig 17
KDO
F
4 153-DEOXY-ALPHA-D-MANNO-OCT-2-ULOPYRANOSONIC
lig 18
KDO
F
5 153-DEOXY-ALPHA-D-MANNO-OCT-2-ULOPYRANOSONIC
lig 19
NO3
B
301 4NITRATE ION