Analysis of Ligand-Protein Contacts in PDB entry:
6CNJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 6CNJ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 7
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 10
NAG
A
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NCT
A
402 12(S)-3-(1-METHYLPYRROLIDIN-2-YL)PYRIDINE
lig 12
Y01
A
403 28CHOLESTEROL HEMISUCCINATE
lig 13
Y01
A
404 28CHOLESTEROL HEMISUCCINATE
lig 14
NA
A
405 1SODIUM ION
lig 15
Y01
B
501 28CHOLESTEROL HEMISUCCINATE
lig 16
Y01
B
502 28CHOLESTEROL HEMISUCCINATE
lig 17
Y01
C
501 28CHOLESTEROL HEMISUCCINATE
lig 18
Y01
C
502 28CHOLESTEROL HEMISUCCINATE
lig 19
NAG
D
401 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NCT
D
402 12(S)-3-(1-METHYLPYRROLIDIN-2-YL)PYRIDINE
lig 21
Y01
D
403 28CHOLESTEROL HEMISUCCINATE
lig 22
Y01
D
404 28CHOLESTEROL HEMISUCCINATE
lig 23
Y01
E
501 28CHOLESTEROL HEMISUCCINATE
lig 24
Y01
E
502 28CHOLESTEROL HEMISUCCINATE