Analysis of Ligand-Protein Contacts in PDB entry:
6CNU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 38 ligands in PDB entry 6CNU. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DGL
A
1 9D-GLUTAMIC ACID
lig 2
F9D
A
2 7(2R)-2-AMINOPENT-4-YNOIC ACID
lig 3
DCY
A
3 6D-CYSTEINE
lig 4
DGN
A
4 9D-GLUTAMINE
lig 5
DLY
A
5 9D-LYSINE
lig 6
DTR
A
6 14D-TRYPTOPHAN
lig 7
MED
A
7 8D-METHIONINE
lig 8
DTR
A
8 14D-TRYPTOPHAN
lig 9
DTH
A
9 7D-THREONINE
lig 10
DCY
A
10 6D-CYSTEINE
lig 11
DAS
A
11 8D-ASPARTIC ACID
lig 12
DSN
A
12 6D-SERINE
lig 13
DAL
A
13 5D-ALANINE
lig 14
DAR
A
14 11D-ARGININE
lig 15
DAL
A
15 5D-ALANINE
lig 16
DCY
A
16 6D-CYSTEINE
lig 17
DCY
A
17 6D-CYSTEINE
lig 18
DGL
A
18 9D-GLUTAMIC ACID
lig 19
DLE
A
20 8D-LEUCINE
lig 20
DAR
A
21 11D-ARGININE
lig 21
DCY
A
22 6D-CYSTEINE
lig 22
DLY
A
23 9D-LYSINE
lig 23
DLE
A
24 8D-LEUCINE
lig 24
DTR
A
25 14D-TRYPTOPHAN
lig 25
DCY
A
26 6D-CYSTEINE
lig 26
DAR
A
27 11D-ARGININE
lig 27
DLY
A
28 9D-LYSINE
lig 28
DGL
A
29 9D-GLUTAMIC ACID
lig 29
DIL
A
30 8D-ISOLEUCINE
lig 30
NH2
A
31 1AMINO GROUP
lig 31
LPH
B
2 7L-PROPARGYLGLYCINE
lig 32
NH2
B
31 1AMINO GROUP
lig 33
BR
A
101 1BROMIDE ION
lig 34
SO4
A
102 5SULFATE ION
lig 35
GOL
A
103 6GLYCEROL
lig 36
BR
B
101 1BROMIDE ION
lig 37
SO4
B
102 5SULFATE ION
lig 38
GOL
B
103 6GLYCEROL