Analysis of Ligand-Protein Contacts in PDB entry:
6DA1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 10 ligands in PDB entry 6DA1. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
C
282 10PHOSPHOSERINE
lig 2
PF5
C
283 162,3,4,5,6-PENTAFLUORO-L-PHENYLALANINE
lig 3
SEP
C
285 10PHOSPHOSERINE
lig 4
PF5
C
286 162,3,4,5,6-PENTAFLUORO-L-PHENYLALANINE
lig 5
PF5
C
288 162,3,4,5,6-PENTAFLUORO-L-PHENYLALANINE
lig 6
PF5
C
291 162,3,4,5,6-PENTAFLUORO-L-PHENYLALANINE
lig 7
NH2
C
297 1AMINO GROUP
lig 8
SO4
A
501 5SULFATE ION
lig 9
SO4
B
501 5SULFATE ION
lig 10
SO4
B
502 5SULFATE ION