Analysis of Ligand-Protein Contacts in PDB entry:
6DFG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 135 ligands in PDB entry 6DFG. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
M
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
P
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
P
5 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
P
6 11ALPHA-D-MANNOPYRANOSE
lig 15
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BMA
R
3 11BETA-D-MANNOPYRANOSE
lig 20
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
BMA
S
3 11BETA-D-MANNOPYRANOSE
lig 23
MAN
S
4 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
S
5 11ALPHA-D-MANNOPYRANOSE
lig 25
MAN
S
6 11ALPHA-D-MANNOPYRANOSE
lig 26
MAN
S
7 11ALPHA-D-MANNOPYRANOSE
lig 27
MAN
S
8 11ALPHA-D-MANNOPYRANOSE
lig 28
MAN
S
9 11ALPHA-D-MANNOPYRANOSE
lig 29
MAN
S
10 11ALPHA-D-MANNOPYRANOSE
lig 30
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
BMA
U
3 11BETA-D-MANNOPYRANOSE
lig 35
MAN
U
4 11ALPHA-D-MANNOPYRANOSE
lig 36
MAN
U
5 11ALPHA-D-MANNOPYRANOSE
lig 37
MAN
U
6 11ALPHA-D-MANNOPYRANOSE
lig 38
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
BMA
W
3 11BETA-D-MANNOPYRANOSE
lig 43
MAN
W
4 11ALPHA-D-MANNOPYRANOSE
lig 44
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
Y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
BMA
Z
3 11BETA-D-MANNOPYRANOSE
lig 51
MAN
Z
4 11ALPHA-D-MANNOPYRANOSE
lig 52
MAN
Z
5 11ALPHA-D-MANNOPYRANOSE
lig 53
MAN
Z
6 11ALPHA-D-MANNOPYRANOSE
lig 54
NAG
a
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
NAG
a
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
BMA
b
3 11BETA-D-MANNOPYRANOSE
lig 59
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 60
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 61
BMA
c
3 11BETA-D-MANNOPYRANOSE
lig 62
MAN
c
4 11ALPHA-D-MANNOPYRANOSE
lig 63
MAN
c
5 11ALPHA-D-MANNOPYRANOSE
lig 64
MAN
c
6 11ALPHA-D-MANNOPYRANOSE
lig 65
MAN
c
7 11ALPHA-D-MANNOPYRANOSE
lig 66
MAN
c
8 11ALPHA-D-MANNOPYRANOSE
lig 67
MAN
c
9 11ALPHA-D-MANNOPYRANOSE
lig 68
MAN
c
10 11ALPHA-D-MANNOPYRANOSE
lig 69
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
NAG
e
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 72
NAG
e
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 73
BMA
e
3 11BETA-D-MANNOPYRANOSE
lig 74
MAN
e
4 11ALPHA-D-MANNOPYRANOSE
lig 75
MAN
e
5 11ALPHA-D-MANNOPYRANOSE
lig 76
MAN
e
6 11ALPHA-D-MANNOPYRANOSE
lig 77
NAG
f
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 78
NAG
f
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 79
NAG
g
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 80
NAG
g
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 81
BMA
g
3 11BETA-D-MANNOPYRANOSE
lig 82
MAN
g
4 11ALPHA-D-MANNOPYRANOSE
lig 83
NAG
h
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 84
NAG
h
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 85
NAG
i
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 86
NAG
i
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 87
NAG
j
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 88
NAG
j
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 89
BMA
j
3 11BETA-D-MANNOPYRANOSE
lig 90
MAN
j
4 11ALPHA-D-MANNOPYRANOSE
lig 91
MAN
j
5 11ALPHA-D-MANNOPYRANOSE
lig 92
MAN
j
6 11ALPHA-D-MANNOPYRANOSE
lig 93
NAG
k
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 94
NAG
k
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 95
NAG
l
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 96
NAG
l
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 97
BMA
l
3 11BETA-D-MANNOPYRANOSE
lig 98
NAG
m
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 99
NAG
m
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 100
BMA
m
3 11BETA-D-MANNOPYRANOSE
lig 101
MAN
m
4 11ALPHA-D-MANNOPYRANOSE
lig 102
MAN
m
5 11ALPHA-D-MANNOPYRANOSE
lig 103
MAN
m
6 11ALPHA-D-MANNOPYRANOSE
lig 104
MAN
m
7 11ALPHA-D-MANNOPYRANOSE
lig 105
MAN
m
8 11ALPHA-D-MANNOPYRANOSE
lig 106
MAN
m
9 11ALPHA-D-MANNOPYRANOSE
lig 107
MAN
m
10 11ALPHA-D-MANNOPYRANOSE
lig 108
NAG
n
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 109
NAG
n
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 110
NAG
o
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 111
NAG
o
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 112
BMA
o
3 11BETA-D-MANNOPYRANOSE
lig 113
MAN
o
4 11ALPHA-D-MANNOPYRANOSE
lig 114
MAN
o
5 11ALPHA-D-MANNOPYRANOSE
lig 115
MAN
o
6 11ALPHA-D-MANNOPYRANOSE
lig 116
NAG
p
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 117
NAG
p
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 118
NAG
A
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 119
NAG
A
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 120
NAG
A
611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 121
NAG
A
623 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 122
NAG
A
634 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 123
NAG
H
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 124
NAG
C
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 125
NAG
C
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 126
NAG
C
611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 127
NAG
C
623 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 128
NAG
C
634 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 129
NAG
G
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 130
NAG
D
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 131
NAG
D
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 132
NAG
D
611 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 133
NAG
D
623 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 134
NAG
D
634 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 135
NAG
I
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE