Analysis of Ligand-Protein Contacts in PDB entry:
6DMC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 38 ligands in PDB entry 6DMC. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GTP
A
1 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
CCC
A
102 23CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHA
lig 3
GTP
B
1 32GUANOSINE-5'-TRIPHOSPHATE
lig 4
CCC
B
102 23CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHA
lig 5
G4P
A
201 36GUANOSINE-5',3'-TETRAPHOSPHATE
lig 6
MG
A
202 1MAGNESIUM ION
lig 7
MG
A
203 1MAGNESIUM ION
lig 8
MG
A
204 1MAGNESIUM ION
lig 9
MG
A
205 1MAGNESIUM ION
lig 10
MG
A
206 1MAGNESIUM ION
lig 11
MG
A
207 1MAGNESIUM ION
lig 12
MG
A
208 1MAGNESIUM ION
lig 13
MG
A
209 1MAGNESIUM ION
lig 14
MG
A
210 1MAGNESIUM ION
lig 15
MG
A
211 1MAGNESIUM ION
lig 16
MG
A
212 1MAGNESIUM ION
lig 17
MG
A
213 1MAGNESIUM ION
lig 18
NA
A
214 1SODIUM ION
lig 19
NA
A
215 1SODIUM ION
lig 20
NA
A
216 1SODIUM ION
lig 21
NA
A
217 1SODIUM ION
lig 22
NA
A
218 1SODIUM ION
lig 23
NA
A
219 1SODIUM ION
lig 24
K
A
220 1POTASSIUM ION
lig 25
G4P
B
201 36GUANOSINE-5',3'-TETRAPHOSPHATE
lig 26
MG
B
202 1MAGNESIUM ION
lig 27
MG
B
203 1MAGNESIUM ION
lig 28
MG
B
204 1MAGNESIUM ION
lig 29
MG
B
205 1MAGNESIUM ION
lig 30
MG
B
206 1MAGNESIUM ION
lig 31
MG
B
207 1MAGNESIUM ION
lig 32
MG
B
208 1MAGNESIUM ION
lig 33
MG
B
209 1MAGNESIUM ION
lig 34
MG
B
210 1MAGNESIUM ION
lig 35
NA
B
211 1SODIUM ION
lig 36
NA
B
212 1SODIUM ION
lig 37
NA
B
213 1SODIUM ION
lig 38
NA
B
214 1SODIUM ION