Analysis of Ligand-Protein Contacts in PDB entry:
6DMY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 6DMY. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
A
1801 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
A
1802 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
A
1803 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
A
1804 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
A
1807 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
Y01
A
1808 35CHOLESTEROL HEMISUCCINATE
lig 9
Y01
A
1809 35CHOLESTEROL HEMISUCCINATE
lig 10
SER
B
201 6SERINE
lig 11
ZN
B
202 1ZINC ION
lig 12
CA
B
203 1CALCIUM ION
lig 13
CA
B
204 1CALCIUM ION