Analysis of Ligand-Protein Contacts in PDB entry:
6DPE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 6DPE. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MN
A
201 1MANGANESE (II) ION
lig 2
MN
A
202 1MANGANESE (II) ION
lig 3
MN
A
203 1MANGANESE (II) ION
lig 4
MN
A
204 1MANGANESE (II) ION
lig 5
K
A
205 1POTASSIUM ION
lig 6
IOD
A
206 1IODIDE ION
lig 7
IOD
A
207 1IODIDE ION
lig 8
IOD
A
208 1IODIDE ION
lig 9
IOD
A
209 1IODIDE ION
lig 10
GOL
A
210 6GLYCEROL
lig 11
GOL
A
211 6GLYCEROL
lig 12
GOL
A
212 6GLYCEROL
lig 13
EDO
A
213 41,2-ETHANEDIOL
lig 14
EDO
A
214 41,2-ETHANEDIOL
lig 15
EDO
A
215 41,2-ETHANEDIOL
lig 16
EDO
A
216 41,2-ETHANEDIOL
lig 17
PGE
A
217 10TRIETHYLENE GLYCOL
lig 18
MN
B
101 1MANGANESE (II) ION
lig 19
IOD
B
102 1IODIDE ION