Analysis of Ligand-Protein Contacts in PDB entry:
6DR5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 33 ligands in PDB entry 6DR5. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ORN
A
1 8L-ORNITHINE
lig 2
MEA
A
5 12N-METHYLPHENYLALANINE
lig 3
ORN
A
9 8L-ORNITHINE
lig 4
CHG
A
11 10CYCLOHEXYL-GLYCINE
lig 5
ORN
A
15 8L-ORNITHINE
lig 6
ORN
B
1 8L-ORNITHINE
lig 7
MEA
B
5 12N-METHYLPHENYLALANINE
lig 8
ORN
B
9 8L-ORNITHINE
lig 9
CHG
B
11 10CYCLOHEXYL-GLYCINE
lig 10
ORN
B
15 8L-ORNITHINE
lig 11
ORN
C
1 8L-ORNITHINE
lig 12
MEA
C
5 12N-METHYLPHENYLALANINE
lig 13
ORN
C
9 8L-ORNITHINE
lig 14
CHG
C
11 10CYCLOHEXYL-GLYCINE
lig 15
ORN
C
15 8L-ORNITHINE
lig 16
ORN
D
1 8L-ORNITHINE
lig 17
MEA
D
5 12N-METHYLPHENYLALANINE
lig 18
ORN
D
9 8L-ORNITHINE
lig 19
CHG
D
11 10CYCLOHEXYL-GLYCINE
lig 20
ORN
D
15 8L-ORNITHINE
lig 21
ORN
E
1 8L-ORNITHINE
lig 22
MEA
E
5 12N-METHYLPHENYLALANINE
lig 23
ORN
E
9 8L-ORNITHINE
lig 24
CHG
E
11 10CYCLOHEXYL-GLYCINE
lig 25
ORN
E
15 8L-ORNITHINE
lig 26
ORN
F
1 8L-ORNITHINE
lig 27
MEA
F
5 12N-METHYLPHENYLALANINE
lig 28
ORN
F
9 8L-ORNITHINE
lig 29
CHG
F
11 10CYCLOHEXYL-GLYCINE
lig 30
ORN
F
15 8L-ORNITHINE
lig 31
MPD
B
101 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 32
MPD
B
102 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 33
MPD
C
101 8(4S)-2-METHYL-2,4-PENTANEDIOL