Analysis of Ligand-Protein Contacts in PDB entry:
6E1M


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 29 ligands in PDB entry 6E1M. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
22 10PHOSPHOSERINE
lig 2
TPO
A
26 11PHOSPHOTHREONINE
lig 3
TPO
A
29 11PHOSPHOTHREONINE
lig 4
SEP
B
22 10PHOSPHOSERINE
lig 5
TPO
B
26 11PHOSPHOTHREONINE
lig 6
TPO
B
29 11PHOSPHOTHREONINE
lig 7
CA
A
801 1CALCIUM ION
lig 8
CA
A
802 1CALCIUM ION
lig 9
CA
A
803 1CALCIUM ION
lig 10
CA
A
804 1CALCIUM ION
lig 11
CA
A
805 1CALCIUM ION
lig 12
PLM
A
806 18PALMITIC ACID
lig 13
PLM
A
807 18PALMITIC ACID
lig 14
PLM
A
808 18PALMITIC ACID
lig 15
PLM
A
809 18PALMITIC ACID
lig 16
PLM
A
810 18PALMITIC ACID
lig 17
PLM
A
811 18PALMITIC ACID
lig 18
PLM
A
812 18PALMITIC ACID
lig 19
3PH
A
813 481,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE
lig 20
CA
B
801 1CALCIUM ION
lig 21
CA
B
802 1CALCIUM ION
lig 22
PLM
B
803 18PALMITIC ACID
lig 23
PLM
B
804 18PALMITIC ACID
lig 24
PLM
B
805 18PALMITIC ACID
lig 25
PLM
B
806 18PALMITIC ACID
lig 26
PLM
B
807 18PALMITIC ACID
lig 27
PLM
B
808 18PALMITIC ACID
lig 28
PLM
B
809 18PALMITIC ACID
lig 29
3PH
B
810 481,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE