Analysis of Ligand-Protein Contacts in PDB entry:
6EDU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 123 ligands in PDB entry 6EDU. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
Y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
Z
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
Z
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
Z
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
Z
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
Z
5 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
a
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
a
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
BMA
a
3 11BETA-D-MANNOPYRANOSE
lig 17
MAN
a
4 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
a
5 11ALPHA-D-MANNOPYRANOSE
lig 19
NAG
b
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
b
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
b
3 11BETA-D-MANNOPYRANOSE
lig 22
NAG
c
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
c
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
d
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
d
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
e
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
e
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
f
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
f
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
g
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
g
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
BMA
g
3 11BETA-D-MANNOPYRANOSE
lig 33
MAN
g
4 11ALPHA-D-MANNOPYRANOSE
lig 34
MAN
g
5 11ALPHA-D-MANNOPYRANOSE
lig 35
NAG
h
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
h
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
BMA
h
3 11BETA-D-MANNOPYRANOSE
lig 38
MAN
h
4 11ALPHA-D-MANNOPYRANOSE
lig 39
MAN
h
5 11ALPHA-D-MANNOPYRANOSE
lig 40
NAG
i
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
i
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
BMA
i
3 11BETA-D-MANNOPYRANOSE
lig 43
NAG
j
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
NAG
j
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
NAG
k
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
k
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
NAG
l
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
NAG
l
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
NAG
m
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
NAG
m
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
n
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
n
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
BMA
n
3 11BETA-D-MANNOPYRANOSE
lig 54
MAN
n
4 11ALPHA-D-MANNOPYRANOSE
lig 55
MAN
n
5 11ALPHA-D-MANNOPYRANOSE
lig 56
NAG
o
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 57
NAG
o
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
BMA
o
3 11BETA-D-MANNOPYRANOSE
lig 59
MAN
o
4 11ALPHA-D-MANNOPYRANOSE
lig 60
MAN
o
5 11ALPHA-D-MANNOPYRANOSE
lig 61
NAG
p
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 62
NAG
p
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 63
BMA
p
3 11BETA-D-MANNOPYRANOSE
lig 64
NAG
q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 65
NAG
q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 66
NAG
r
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 67
NAG
r
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 68
NAG
s
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 69
NAG
s
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
NAG
t
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
NAG
t
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 72
BMA
t
3 11BETA-D-MANNOPYRANOSE
lig 73
MAN
t
4 11ALPHA-D-MANNOPYRANOSE
lig 74
MAN
t
5 11ALPHA-D-MANNOPYRANOSE
lig 75
MAN
t
6 11ALPHA-D-MANNOPYRANOSE
lig 76
MAN
t
7 11ALPHA-D-MANNOPYRANOSE
lig 77
MAN
t
8 11ALPHA-D-MANNOPYRANOSE
lig 78
MAN
t
9 11ALPHA-D-MANNOPYRANOSE
lig 79
NAG
u
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 80
NAG
u
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 81
BMA
u
3 11BETA-D-MANNOPYRANOSE
lig 82
MAN
u
4 11ALPHA-D-MANNOPYRANOSE
lig 83
MAN
u
5 11ALPHA-D-MANNOPYRANOSE
lig 84
MAN
u
6 11ALPHA-D-MANNOPYRANOSE
lig 85
MAN
u
7 11ALPHA-D-MANNOPYRANOSE
lig 86
MAN
u
8 11ALPHA-D-MANNOPYRANOSE
lig 87
MAN
u
9 11ALPHA-D-MANNOPYRANOSE
lig 88
NAG
v
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 89
NAG
v
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 90
BMA
v
3 11BETA-D-MANNOPYRANOSE
lig 91
MAN
v
4 11ALPHA-D-MANNOPYRANOSE
lig 92
MAN
v
5 11ALPHA-D-MANNOPYRANOSE
lig 93
MAN
v
6 11ALPHA-D-MANNOPYRANOSE
lig 94
MAN
v
7 11ALPHA-D-MANNOPYRANOSE
lig 95
MAN
v
8 11ALPHA-D-MANNOPYRANOSE
lig 96
MAN
v
9 11ALPHA-D-MANNOPYRANOSE
lig 97
NAG
A
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 98
NAG
B
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 99
NAG
C
701 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 100
NAG
D
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 101
NAG
D
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 102
NAG
D
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 103
NAG
D
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 104
NAG
D
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 105
NAG
D
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 106
NAG
D
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 107
NAG
D
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 108
NAG
E
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 109
NAG
E
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 110
NAG
E
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 111
NAG
E
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 112
NAG
E
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 113
NAG
E
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 114
NAG
E
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 115
NAG
E
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 116
NAG
F
601 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 117
NAG
F
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 118
NAG
F
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 119
NAG
F
604 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 120
NAG
F
605 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 121
NAG
F
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 122
NAG
F
607 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 123
NAG
F
608 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE