Analysis of Ligand-Protein Contacts in PDB entry:
6EPK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 53 ligands in PDB entry 6EPK. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 6
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 8
FUC
F
6 10ALPHA-L-FUCOPYRANOSE
lig 9
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 12
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 15
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 17
FUC
H
6 10ALPHA-L-FUCOPYRANOSE
lig 18
SO4
A
501 5SULFATE ION
lig 19
SO4
A
502 5SULFATE ION
lig 20
SO4
A
503 5SULFATE ION
lig 21
SO4
A
504 5SULFATE ION
lig 22
SO4
A
505 5SULFATE ION
lig 23
SO4
A
506 5SULFATE ION
lig 24
SO4
A
507 5SULFATE ION
lig 25
SO4
A
508 5SULFATE ION
lig 26
SO4
A
509 5SULFATE ION
lig 27
GOL
A
510 6GLYCEROL
lig 28
GOL
A
511 6GLYCEROL
lig 29
GOL
A
512 6GLYCEROL
lig 30
GOL
A
513 6GLYCEROL
lig 31
GOL
A
514 6GLYCEROL
lig 32
SO4
B
709 5SULFATE ION
lig 33
SO4
B
710 5SULFATE ION
lig 34
GOL
B
711 6GLYCEROL
lig 35
GOL
B
712 6GLYCEROL
lig 36
SO4
D
501 5SULFATE ION
lig 37
SO4
D
502 5SULFATE ION
lig 38
SO4
D
503 5SULFATE ION
lig 39
SO4
D
504 5SULFATE ION
lig 40
SO4
D
505 5SULFATE ION
lig 41
SO4
D
506 5SULFATE ION
lig 42
SO4
D
507 5SULFATE ION
lig 43
SO4
D
508 5SULFATE ION
lig 44
SO4
D
509 5SULFATE ION
lig 45
SO4
D
510 5SULFATE ION
lig 46
SO4
D
511 5SULFATE ION
lig 47
GOL
D
512 6GLYCEROL
lig 48
GOL
D
513 6GLYCEROL
lig 49
GOL
D
514 6GLYCEROL
lig 50
GOL
D
515 6GLYCEROL
lig 51
GOL
D
516 6GLYCEROL
lig 52
GOL
D
517 6GLYCEROL
lig 53
SO4
E
710 5SULFATE ION