Analysis of Ligand-Protein Contacts in PDB entry:
6F5K


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 6F5K. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
OHI
A
98 113-(2-OXO-2H-IMIDAZOL-4-YL)-L-ALANINE
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 5
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
B
5 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
D
6 11ALPHA-D-MANNOPYRANOSE
lig 15
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 18
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 21
CU
A
601 1COPPER (II) ION
lig 22
CU
A
602 1COPPER (II) ION
lig 23
CU
A
603 1COPPER (II) ION
lig 24
CU
A
604 1COPPER (II) ION
lig 25
CA
A
605 1CALCIUM ION
lig 26
CA
A
606 1CALCIUM ION
lig 27
NAG
A
626 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
A
627 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
2PE
A
628 10NONAETHYLENE GLYCOL
lig 30
OH
A
629 1HYDROXIDE ION