Analysis of Ligand-Protein Contacts in PDB entry:
6FDS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 6FDS. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GAI
A
1001 4GUANIDINE
lig 2
D5T
A
1002 40 DIMETHYL-PIPERIDINE-2,6-DIONE
lig 3
GAI
A
1003 4GUANIDINE
lig 4
GAI
A
1004 4GUANIDINE
lig 5
ZN
A
1005 1ZINC ION
lig 6
MG
A
1006 1MAGNESIUM ION
lig 7
GAI
A
1007 4GUANIDINE
lig 8
MG
B
1001 1MAGNESIUM ION
lig 9
ZN
B
1002 1ZINC ION
lig 10
GOL
B
1003 6GLYCEROL
lig 11
GAI
B
1004 4GUANIDINE
lig 12
GAI
B
1005 4GUANIDINE
lig 13
D5T
B
1006 40 DIMETHYL-PIPERIDINE-2,6-DIONE