Analysis of Ligand-Protein Contacts in PDB entry:
6G2J


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 46 ligands in PDB entry 6G2J. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FME
A
1 10N-FORMYLMETHIONINE
lig 2
2MR
D
85 13N3, N4-DIMETHYLARGININE
lig 3
FME
H
1 10N-FORMYLMETHIONINE
lig 4
FME
J
1 10N-FORMYLMETHIONINE
lig 5
FME
K
1 10N-FORMYLMETHIONINE
lig 6
FME
L
1 10N-FORMYLMETHIONINE
lig 7
FME
M
1 10N-FORMYLMETHIONINE
lig 8
FME
N
1 10N-FORMYLMETHIONINE
lig 9
AYA
b
1 8N-ACETYLALANINE
lig 10
SAC
i
1 9N-ACETYL-SERINE
lig 11
AME
q
1 11N-ACETYLMETHIONINE
lig 12
AYA
r
1 8N-ACETYLALANINE
lig 13
3PE
A
201 411,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 14
SF4
B
201 8IRON/SULFUR CLUSTER
lig 15
FES
E
301 4FE2/S2 (INORGANIC) CLUSTER
lig 16
FMN
F
501 31FLAVIN MONONUCLEOTIDE
lig 17
SF4
F
502 8IRON/SULFUR CLUSTER
lig 18
SF4
G
801 8IRON/SULFUR CLUSTER
lig 19
SF4
G
802 8IRON/SULFUR CLUSTER
lig 20
FES
G
803 4FE2/S2 (INORGANIC) CLUSTER
lig 21
3PE
H
401 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 22
PC1
H
402 421,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 23
3PE
H
403 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 24
PC1
H
404 471,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 25
CDL
H
405 57CARDIOLIPIN
lig 26
PC1
H
406 351,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 27
SF4
I
201 8IRON/SULFUR CLUSTER
lig 28
SF4
I
202 8IRON/SULFUR CLUSTER
lig 29
3PE
L
701 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 30
CDL
L
702 78CARDIOLIPIN
lig 31
CDL
L
703 70CARDIOLIPIN
lig 32
3PE
L
704 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 33
3PE
M
501 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 34
3PE
M
502 421,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 35
3PE
M
503 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 36
3PE
M
504 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 37
3PE
M
505 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 38
3PE
M
506 311,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 39
CDL
M
507 67CARDIOLIPIN
lig 40
3PE
N
401 511,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 41
ADP
O
401 27ADENOSINE-5'-DIPHOSPHATE
lig 42
PC1
P
401 431,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 43
NDP
P
501 48 PHOSPHATE
lig 44
ZN
R
201 1ZINC ION
lig 45
EHZ
T
201 34 (3~{S})-3-OXIDANYLTETRADECANETHIOATE
lig 46
EHZ
U
201 35 (3~{S})-3-OXIDANYLTETRADECANETHIOATE