Analysis of Ligand-Protein Contacts in PDB entry:
6GSZ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 68 ligands in PDB entry 6GSZ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 8
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
C
7 11ALPHA-D-MANNOPYRANOSE
lig 12
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 15
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 17
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 22
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 25
NAG
A
917 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
A
920 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
CA
A
927 1CALCIUM ION
lig 28
CA
A
928 1CALCIUM ION
lig 29
CA
A
929 1CALCIUM ION
lig 30
CA
A
930 1CALCIUM ION
lig 31
CA
A
931 1CALCIUM ION
lig 32
CA
A
932 1CALCIUM ION
lig 33
CA
A
933 1CALCIUM ION
lig 34
CA
A
934 1CALCIUM ION
lig 35
CA
A
935 1CALCIUM ION
lig 36
CA
A
936 1CALCIUM ION
lig 37
CA
A
937 1CALCIUM ION
lig 38
CA
A
938 1CALCIUM ION
lig 39
CA
A
939 1CALCIUM ION
lig 40
CA
A
940 1CALCIUM ION
lig 41
CA
A
941 1CALCIUM ION
lig 42
CA
A
942 1CALCIUM ION
lig 43
CA
A
943 1CALCIUM ION
lig 44
CA
A
944 1CALCIUM ION
lig 45
CA
A
945 1CALCIUM ION
lig 46
CA
A
946 1CALCIUM ION
lig 47
CA
A
947 1CALCIUM ION
lig 48
1PE
A
948 16PENTAETHYLENE GLYCOL
lig 49
PG4
A
949 13TETRAETHYLENE GLYCOL
lig 50
PGE
A
950 9TRIETHYLENE GLYCOL
lig 51
PG0
A
951 72-(2-METHOXYETHOXY)ETHANOL
lig 52
PG0
A
952 82-(2-METHOXYETHOXY)ETHANOL
lig 53
PGE
A
953 9TRIETHYLENE GLYCOL
lig 54
1PE
A
954 15PENTAETHYLENE GLYCOL
lig 55
1PE
A
955 16PENTAETHYLENE GLYCOL
lig 56
PGE
A
956 10TRIETHYLENE GLYCOL
lig 57
PG0
A
957 72-(2-METHOXYETHOXY)ETHANOL
lig 58
EDO
A
958 41,2-ETHANEDIOL
lig 59
PGE
A
959 10TRIETHYLENE GLYCOL
lig 60
DTU
A
960 8(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL
lig 61
ACT
A
961 4ACETATE ION
lig 62
ACT
A
962 4ACETATE ION
lig 63
ACT
A
963 4ACETATE ION
lig 64
ACT
A
964 4ACETATE ION
lig 65
ACT
A
965 4ACETATE ION
lig 66
ACT
A
966 4ACETATE ION
lig 67
MPO
A
967 133[N-MORPHOLINO]PROPANE SULFONIC ACID
lig 68
BGC
A
968 12BETA-D-GLUCOPYRANOSE