Analysis of Ligand-Protein Contacts in PDB entry:
6GVA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 10 ligands in PDB entry 6GVA. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
160 11PHOSPHOTHREONINE
lig 2
FCQ
A
301 30 D]PYRIMIDIN-7-AMINE
lig 3
EDO
A
302 41,2-ETHANEDIOL
lig 4
EDO
A
303 41,2-ETHANEDIOL
lig 5
CL
A
304 1CHLORIDE ION
lig 6
BR
A
305 1BROMIDE ION
lig 7
PG4
B
501 13TETRAETHYLENE GLYCOL
lig 8
EDO
B
502 41,2-ETHANEDIOL
lig 9
SGM
B
503 6MONOTHIOGLYCEROL
lig 10
PGE
B
504 10TRIETHYLENE GLYCOL