Analysis of Ligand-Protein Contacts in PDB entry:
6GYO


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 48 ligands in PDB entry 6GYO. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CMP
A
801 22ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
lig 2
PC1
A
809 421,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 3
PC1
A
803 291,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 4
PC1
A
804 271,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 5
PC1
A
805 181,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 6
PIE
A
812 321,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL
lig 7
3PE
A
810 461,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 8
3PE
A
811 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 9
PC1
A
806 291,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 10
PC1
A
807 321,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 11
PC1
A
808 201,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 12
UNX
A
802 1UNKNOWN ATOM OR ION
lig 13
UNX
B
802 1UNKNOWN ATOM OR ION
lig 14
PC1
B
808 321,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 15
PC1
B
809 201,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 16
CMP
B
801 22ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
lig 17
PC1
B
804 421,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 18
PC1
B
805 291,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 19
PC1
B
806 271,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 20
PC1
B
807 181,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 21
PIE
B
812 321,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL
lig 22
3PE
B
811 461,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 23
3PE
B
810 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 24
PC1
B
803 291,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 25
UNX
C
802 1UNKNOWN ATOM OR ION
lig 26
PC1
C
808 321,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 27
PC1
C
809 201,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 28
CMP
C
801 22ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
lig 29
PC1
C
804 421,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 30
PC1
C
805 291,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 31
PC1
C
806 271,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 32
PC1
C
807 181,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 33
PIE
C
812 321,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL
lig 34
3PE
C
811 461,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 35
3PE
C
810 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 36
PC1
C
803 291,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 37
UNX
D
802 1UNKNOWN ATOM OR ION
lig 38
PC1
D
804 291,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 39
PC1
D
809 321,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 40
PC1
D
803 201,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 41
CMP
D
801 22ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
lig 42
PC1
D
805 421,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 43
PC1
D
806 291,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 44
PC1
D
807 271,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 45
PC1
D
808 181,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
lig 46
PIE
D
812 321,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL
lig 47
3PE
D
810 461,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI
lig 48
3PE
D
811 401,2-DISTEAROYL-SN-GLYCEROPHOSPHOETHANOLAMI