Analysis of Ligand-Protein Contacts in PDB entry:
6H06


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 13 ligands in PDB entry 6H06. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PCA
H
1 8PYROGLUTAMIC ACID
lig 2
PCA
A
1 8PYROGLUTAMIC ACID
lig 3
PCA
C
1 8PYROGLUTAMIC ACID
lig 4
PCA
E
1 8PYROGLUTAMIC ACID
lig 5
SEP
I
422 10PHOSPHOSERINE
lig 6
SEP
G
422 10PHOSPHOSERINE
lig 7
SEP
J
422 10PHOSPHOSERINE
lig 8
SEP
K
422 10PHOSPHOSERINE
lig 9
GOL
L
301 6GLYCEROL
lig 10
GOL
A
301 6GLYCEROL
lig 11
GOL
B
301 6GLYCEROL
lig 12
GOL
D
301 6GLYCEROL
lig 13
GOL
F
301 6GLYCEROL