Analysis of Ligand-Protein Contacts in PDB entry:
6HCE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 18 ligands in PDB entry 6HCE. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
A
213 10PHOSPHOSERINE
lig 2
SEP
A
214 10PHOSPHOSERINE
lig 3
NAG
A
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
A
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
GOL
A
303 6GLYCEROL
lig 6
GOL
A
304 6GLYCEROL
lig 7
GOL
A
305 6GLYCEROL
lig 8
GOL
A
306 6GLYCEROL
lig 9
GOL
A
307 6GLYCEROL
lig 10
SO4
A
308 5SULFATE ION
lig 11
SO4
A
309 5SULFATE ION
lig 12
SO4
A
310 5SULFATE ION
lig 13
ACT
A
311 4ACETATE ION
lig 14
ACT
A
312 4ACETATE ION
lig 15
ACT
A
313 4ACETATE ION
lig 16
CL
A
314 1CHLORIDE ION
lig 17
CL
A
315 1CHLORIDE ION
lig 18
EDO
A
316 41,2-ETHANEDIOL