Analysis of Ligand-Protein Contacts in PDB entry:
6HJD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 45 ligands in PDB entry 6HJD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NDG
K
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 2
FUC
K
2 10ALPHA-L-FUCOPYRANOSE
lig 3
GAL
K
3 11BETA-D-GALACTOPYRANOSE
lig 4
NDG
L
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 5
FUC
L
2 10ALPHA-L-FUCOPYRANOSE
lig 6
GAL
L
3 11BETA-D-GALACTOPYRANOSE
lig 7
NAG
M
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
FUC
M
2 10ALPHA-L-FUCOPYRANOSE
lig 9
GAL
M
3 11BETA-D-GALACTOPYRANOSE
lig 10
NDG
N
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 11
FUC
N
2 10ALPHA-L-FUCOPYRANOSE
lig 12
GAL
N
3 11BETA-D-GALACTOPYRANOSE
lig 13
NAG
O
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
FUC
O
2 10ALPHA-L-FUCOPYRANOSE
lig 15
GAL
O
3 11BETA-D-GALACTOPYRANOSE
lig 16
NDG
P
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 17
FUC
P
2 10ALPHA-L-FUCOPYRANOSE
lig 18
GAL
P
3 11BETA-D-GALACTOPYRANOSE
lig 19
NDG
Q
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 20
FUC
Q
2 10ALPHA-L-FUCOPYRANOSE
lig 21
GAL
Q
3 11BETA-D-GALACTOPYRANOSE
lig 22
NDG
R
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 23
FUC
R
2 10ALPHA-L-FUCOPYRANOSE
lig 24
GAL
R
3 11BETA-D-GALACTOPYRANOSE
lig 25
CA
A
201 1CALCIUM ION
lig 26
BCN
A
202 11BICINE
lig 27
CA
B
201 1CALCIUM ION
lig 28
BCN
B
202 11BICINE
lig 29
CA
C
201 1CALCIUM ION
lig 30
CA
D
201 1CALCIUM ION
lig 31
BCN
D
202 11BICINE
lig 32
BCN
D
203 11BICINE
lig 33
CA
E
201 1CALCIUM ION
lig 34
CA
F
201 1CALCIUM ION
lig 35
BCN
F
202 11BICINE
lig 36
FUC
F
203 11ALPHA-L-FUCOPYRANOSE
lig 37
CA
G
201 1CALCIUM ION
lig 38
BCN
G
202 11BICINE
lig 39
BCN
G
203 11BICINE
lig 40
CA
H
201 1CALCIUM ION
lig 41
CA
I
201 1CALCIUM ION
lig 42
BCN
I
202 11BICINE
lig 43
BCN
I
203 11BICINE
lig 44
CA
J
201 1CALCIUM ION
lig 45
BCN
J
202 11BICINE