Analysis of Ligand-Protein Contacts in PDB entry:
6HKU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 6HKU. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GAL
K
1 12BETA-D-GALACTOPYRANOSE
lig 2
SIA
K
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 3
GAL
L
1 12BETA-D-GALACTOPYRANOSE
lig 4
SIA
L
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 5
GAL
M
1 12BETA-D-GALACTOPYRANOSE
lig 6
SIA
M
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 7
GLC
N
1 12ALPHA-D-GLUCOPYRANOSE
lig 8
GAL
N
2 11BETA-D-GALACTOPYRANOSE
lig 9
SIA
N
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 10
GLC
O
1 12ALPHA-D-GLUCOPYRANOSE
lig 11
GAL
O
2 11BETA-D-GALACTOPYRANOSE
lig 12
SIA
O
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 13
GOL
C
403 6GLYCEROL
lig 14
SIA
D
401 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 15
GOL
H
401 6GLYCEROL