Analysis of Ligand-Protein Contacts in PDB entry:
6I01


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 55 ligands in PDB entry 6I01. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BDP
C
1 13BETA-D-GLUCOPYRANURONIC ACID
lig 2
GNS
C
2 152-DEOXY-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANO
lig 3
BDP
C
3 12BETA-D-GLUCOPYRANURONIC ACID
lig 4
GNS
C
4 152-DEOXY-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANO
lig 5
BDP
C
5 12BETA-D-GLUCOPYRANURONIC ACID
lig 6
GNS
C
6 152-DEOXY-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANO
lig 7
BDP
C
7 12BETA-D-GLUCOPYRANURONIC ACID
lig 8
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 11
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 12
NAG
D
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
MAN
D
6 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 17
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 19
BDP
F
1 13BETA-D-GLUCOPYRANURONIC ACID
lig 20
GNS
F
2 152-DEOXY-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANO
lig 21
BDP
F
3 12BETA-D-GLUCOPYRANURONIC ACID
lig 22
GNS
F
4 152-DEOXY-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANO
lig 23
BDP
F
5 12BETA-D-GLUCOPYRANURONIC ACID
lig 24
GNS
F
6 152-DEOXY-2-(SULFOAMINO)-ALPHA-D-GLUCOPYRANO
lig 25
BDP
F
7 12BETA-D-GLUCOPYRANURONIC ACID
lig 26
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 29
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 30
NAG
G
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 34
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 35
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 36
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
A
719 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
GOL
A
720 6GLYCEROL
lig 40
GOL
A
721 6GLYCEROL
lig 41
GOL
A
722 6GLYCEROL
lig 42
GOL
A
723 6GLYCEROL
lig 43
GOL
A
724 6GLYCEROL
lig 44
GOL
A
725 6GLYCEROL
lig 45
GOL
A
726 6GLYCEROL
lig 46
ACT
A
727 4ACETATE ION
lig 47
CA
A
728 1CALCIUM ION
lig 48
GOL
B
720 6GLYCEROL
lig 49
GOL
B
721 6GLYCEROL
lig 50
GOL
B
722 6GLYCEROL
lig 51
GOL
B
723 6GLYCEROL
lig 52
GOL
B
724 6GLYCEROL
lig 53
GOL
B
725 6GLYCEROL
lig 54
GOL
B
726 6GLYCEROL
lig 55
CA
B
727 1CALCIUM ION