Analysis of Ligand-Protein Contacts in PDB entry:
6IBK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 50 ligands in PDB entry 6IBK. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 8
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 15
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 17
ACT
A
508 4ACETATE ION
lig 18
SO4
A
511 5SULFATE ION
lig 19
SO4
A
512 5SULFATE ION
lig 20
SO4
A
513 5SULFATE ION
lig 21
SO4
A
514 5SULFATE ION
lig 22
SO4
A
515 5SULFATE ION
lig 23
SO4
A
516 5SULFATE ION
lig 24
EDO
A
517 41,2-ETHANEDIOL
lig 25
EDO
A
518 41,2-ETHANEDIOL
lig 26
EDO
A
519 41,2-ETHANEDIOL
lig 27
EDO
A
520 41,2-ETHANEDIOL
lig 28
EDO
A
521 41,2-ETHANEDIOL
lig 29
EDO
A
522 41,2-ETHANEDIOL
lig 30
EDO
A
523 41,2-ETHANEDIOL
lig 31
EDO
A
524 41,2-ETHANEDIOL
lig 32
YTW
A
525 16 6-TRIOL
lig 33
PEG
A
526 7DI(HYDROXYETHYL)ETHER
lig 34
PEG
A
527 7DI(HYDROXYETHYL)ETHER
lig 35
PEG
A
528 7DI(HYDROXYETHYL)ETHER
lig 36
NAG
B
508 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
ACT
B
509 4ACETATE ION
lig 38
ACT
B
510 4ACETATE ION
lig 39
SO4
B
511 5SULFATE ION
lig 40
SO4
B
512 5SULFATE ION
lig 41
SO4
B
513 5SULFATE ION
lig 42
SO4
B
514 5SULFATE ION
lig 43
SO4
B
515 5SULFATE ION
lig 44
EDO
B
516 41,2-ETHANEDIOL
lig 45
EDO
B
517 41,2-ETHANEDIOL
lig 46
EDO
B
518 41,2-ETHANEDIOL
lig 47
EDO
B
519 41,2-ETHANEDIOL
lig 48
YTW
B
520 16 6-TRIOL
lig 49
PEG
B
521 7DI(HYDROXYETHYL)ETHER
lig 50
PEG
B
522 7DI(HYDROXYETHYL)ETHER