Analysis of Ligand-Protein Contacts in PDB entry:
6IBM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 51 ligands in PDB entry 6IBM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 9
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 15
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 20
PEG
A
509 7DI(HYDROXYETHYL)ETHER
lig 21
PEG
A
510 7DI(HYDROXYETHYL)ETHER
lig 22
ACT
A
511 4ACETATE ION
lig 23
ACT
A
512 4ACETATE ION
lig 24
ACT
A
513 4ACETATE ION
lig 25
SO4
A
514 5SULFATE ION
lig 26
SO4
A
515 5SULFATE ION
lig 27
SO4
A
516 5SULFATE ION
lig 28
HF8
A
517 16 HYDROGEN SULFATE
lig 29
EDO
A
518 41,2-ETHANEDIOL
lig 30
EDO
A
519 41,2-ETHANEDIOL
lig 31
EDO
A
520 41,2-ETHANEDIOL
lig 32
EDO
A
521 41,2-ETHANEDIOL
lig 33
EDO
A
522 41,2-ETHANEDIOL
lig 34
EDO
A
523 41,2-ETHANEDIOL
lig 35
EDO
A
524 41,2-ETHANEDIOL
lig 36
EDO
A
525 41,2-ETHANEDIOL
lig 37
EDO
A
526 41,2-ETHANEDIOL
lig 38
ACT
B
512 4ACETATE ION
lig 39
SO4
B
513 5SULFATE ION
lig 40
SO4
B
514 5SULFATE ION
lig 41
SO4
B
515 5SULFATE ION
lig 42
HF8
B
516 16 HYDROGEN SULFATE
lig 43
EDO
B
517 41,2-ETHANEDIOL
lig 44
EDO
B
518 41,2-ETHANEDIOL
lig 45
EDO
B
519 41,2-ETHANEDIOL
lig 46
EDO
B
520 41,2-ETHANEDIOL
lig 47
EDO
B
521 41,2-ETHANEDIOL
lig 48
EDO
B
522 41,2-ETHANEDIOL
lig 49
EDO
B
523 41,2-ETHANEDIOL
lig 50
EDO
B
524 41,2-ETHANEDIOL
lig 51
EDO
B
525 41,2-ETHANEDIOL