Analysis of Ligand-Protein Contacts in PDB entry:
6IKM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 72 ligands in PDB entry 6IKM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SO4
A
401 5SULFATE ION
lig 2
SO4
A
402 5SULFATE ION
lig 3
SO4
A
403 5SULFATE ION
lig 4
SPD
A
404 10SPERMIDINE
lig 5
SO4
B
401 5SULFATE ION
lig 6
SO4
B
402 5SULFATE ION
lig 7
SO4
B
403 5SULFATE ION
lig 8
SO4
B
404 5SULFATE ION
lig 9
SPD
B
405 10SPERMIDINE
lig 10
SO4
C
401 5SULFATE ION
lig 11
SO4
C
402 5SULFATE ION
lig 12
SO4
C
403 5SULFATE ION
lig 13
SPD
C
404 10SPERMIDINE
lig 14
SO4
D
401 5SULFATE ION
lig 15
SO4
D
402 5SULFATE ION
lig 16
SO4
D
403 5SULFATE ION
lig 17
SPD
D
404 10SPERMIDINE
lig 18
SO4
E
401 5SULFATE ION
lig 19
SO4
E
402 5SULFATE ION
lig 20
SO4
E
403 5SULFATE ION
lig 21
SO4
E
404 5SULFATE ION
lig 22
SPD
E
405 10SPERMIDINE
lig 23
SO4
F
401 5SULFATE ION
lig 24
SO4
F
402 5SULFATE ION
lig 25
SO4
F
403 5SULFATE ION
lig 26
SPD
F
404 10SPERMIDINE
lig 27
SO4
G
401 5SULFATE ION
lig 28
SO4
G
402 5SULFATE ION
lig 29
SPD
G
403 10SPERMIDINE
lig 30
SO4
H
401 5SULFATE ION
lig 31
SO4
H
402 5SULFATE ION
lig 32
SPD
H
403 10SPERMIDINE
lig 33
SO4
I
401 5SULFATE ION
lig 34
SO4
I
402 5SULFATE ION
lig 35
SO4
I
403 5SULFATE ION
lig 36
SPD
I
404 10SPERMIDINE
lig 37
SO4
J
401 5SULFATE ION
lig 38
SO4
J
402 5SULFATE ION
lig 39
SO4
J
403 5SULFATE ION
lig 40
SPD
J
404 10SPERMIDINE
lig 41
SO4
K
401 5SULFATE ION
lig 42
SO4
K
402 5SULFATE ION
lig 43
SO4
K
403 5SULFATE ION
lig 44
SPD
K
404 10SPERMIDINE
lig 45
SO4
L
401 5SULFATE ION
lig 46
SO4
L
402 5SULFATE ION
lig 47
SO4
L
403 5SULFATE ION
lig 48
SPD
L
404 10SPERMIDINE
lig 49
SO4
M
401 5SULFATE ION
lig 50
SO4
M
402 5SULFATE ION
lig 51
SO4
M
403 5SULFATE ION
lig 52
SPD
M
404 10SPERMIDINE
lig 53
SO4
N
401 5SULFATE ION
lig 54
SO4
N
402 5SULFATE ION
lig 55
SO4
N
403 5SULFATE ION
lig 56
SO4
N
404 5SULFATE ION
lig 57
SO4
N
405 5SULFATE ION
lig 58
SO4
N
406 5SULFATE ION
lig 59
SPD
N
407 10SPERMIDINE
lig 60
SO4
O
401 5SULFATE ION
lig 61
SO4
O
402 5SULFATE ION
lig 62
SO4
O
403 5SULFATE ION
lig 63
SO4
O
404 5SULFATE ION
lig 64
SO4
O
405 5SULFATE ION
lig 65
SO4
O
406 5SULFATE ION
lig 66
SPD
O
407 10SPERMIDINE
lig 67
SPD
P
401 10SPERMIDINE
lig 68
SPD
Q
401 10SPERMIDINE
lig 69
SO4
R
401 5SULFATE ION
lig 70
SO4
R
402 5SULFATE ION
lig 71
SO4
R
403 5SULFATE ION
lig 72
SPD
R
404 10SPERMIDINE