Analysis of Ligand-Protein Contacts in PDB entry:
6JD0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 51 ligands in PDB entry 6JD0. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GOL
A
401 6GLYCEROL
lig 2
GOL
A
402 6GLYCEROL
lig 3
GOL
A
403 6GLYCEROL
lig 4
GOL
A
404 6GLYCEROL
lig 5
GOL
A
405 6GLYCEROL
lig 6
GOL
A
406 6GLYCEROL
lig 7
GOL
A
407 6GLYCEROL
lig 8
GOL
A
408 6GLYCEROL
lig 9
GOL
A
409 6GLYCEROL
lig 10
GOL
A
410 6GLYCEROL
lig 11
GOL
A
411 6GLYCEROL
lig 12
GOL
A
412 6GLYCEROL
lig 13
GOL
A
413 6GLYCEROL
lig 14
GOL
A
414 6GLYCEROL
lig 15
CL
A
415 1CHLORIDE ION
lig 16
CL
A
416 1CHLORIDE ION
lig 17
CL
A
417 1CHLORIDE ION
lig 18
NA
A
418 1SODIUM ION
lig 19
NA
A
419 1SODIUM ION
lig 20
NA
A
420 1SODIUM ION
lig 21
NA
A
421 1SODIUM ION
lig 22
NA
A
422 1SODIUM ION
lig 23
PO4
A
423 5PHOSPHATE ION
lig 24
PO4
A
424 5PHOSPHATE ION
lig 25
PO4
A
425 5PHOSPHATE ION
lig 26
PO4
A
426 5PHOSPHATE ION
lig 27
PO4
A
427 5PHOSPHATE ION
lig 28
PO4
A
428 5PHOSPHATE ION
lig 29
PO4
A
429 5PHOSPHATE ION
lig 30
PO4
A
430 5PHOSPHATE ION
lig 31
POL
A
431 4N-PROPANOL
lig 32
POL
A
432 4N-PROPANOL
lig 33
POL
A
433 4N-PROPANOL
lig 34
POL
A
434 4N-PROPANOL
lig 35
POL
A
435 4N-PROPANOL
lig 36
POL
A
436 4N-PROPANOL
lig 37
POL
A
437 4N-PROPANOL
lig 38
POL
A
438 4N-PROPANOL
lig 39
POL
A
439 4N-PROPANOL
lig 40
POL
A
440 4N-PROPANOL
lig 41
PGE
A
441 10TRIETHYLENE GLYCOL
lig 42
PGE
A
442 10TRIETHYLENE GLYCOL
lig 43
PGE
A
443 10TRIETHYLENE GLYCOL
lig 44
PGE
A
444 10TRIETHYLENE GLYCOL
lig 45
PGE
A
445 10TRIETHYLENE GLYCOL
lig 46
PGE
A
446 10TRIETHYLENE GLYCOL
lig 47
EOH
A
447 3ETHANOL
lig 48
EOH
A
448 3ETHANOL
lig 49
EOH
A
449 3ETHANOL
lig 50
EDO
A
450 41,2-ETHANEDIOL
lig 51
EDO
A
451 41,2-ETHANEDIOL