Analysis of Ligand-Protein Contacts in PDB entry:
6JDY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 6JDY. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
XYP
C
1 10BETA-D-XYLOPYRANOSE
lig 2
XYP
C
2 9BETA-D-XYLOPYRANOSE
lig 3
XYP
D
1 10BETA-D-XYLOPYRANOSE
lig 4
XYP
D
2 9BETA-D-XYLOPYRANOSE
lig 5
XYP
E
1 10BETA-D-XYLOPYRANOSE
lig 6
XYP
E
2 9BETA-D-XYLOPYRANOSE
lig 7
XYP
F
1 10BETA-D-XYLOPYRANOSE
lig 8
XYP
F
2 9BETA-D-XYLOPYRANOSE
lig 9
NAG
A
505 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
PEG
A
506 7DI(HYDROXYETHYL)ETHER
lig 11
NAG
B
505 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
MES
B
506 122-(N-MORPHOLINO)-ETHANESULFONIC ACID