Analysis of Ligand-Protein Contacts in PDB entry:
6JGD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 6JGD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
U1Y
B
1 13METHYL 6-THIO-BETA-D-GLUCOPYRANOSIDE
lig 2
BGC
B
2 11BETA-D-GLUCOPYRANOSE
lig 3
1PE
A
701 5PENTAETHYLENE GLYCOL
lig 4
1PE
A
702 10PENTAETHYLENE GLYCOL
lig 5
1PE
A
703 4PENTAETHYLENE GLYCOL
lig 6
1PE
A
704 4PENTAETHYLENE GLYCOL
lig 7
1PE
A
705 10PENTAETHYLENE GLYCOL
lig 8
1PE
A
706 6PENTAETHYLENE GLYCOL
lig 9
1PE
A
707 7PENTAETHYLENE GLYCOL
lig 10
1PE
A
708 5PENTAETHYLENE GLYCOL
lig 11
1PE
A
709 6PENTAETHYLENE GLYCOL
lig 12
GOL
A
711 6GLYCEROL
lig 13
GOL
A
712 6GLYCEROL
lig 14
GOL
A
713 6GLYCEROL
lig 15
GOL
A
714 6GLYCEROL
lig 16
GOL
A
715 6GLYCEROL
lig 17
SO4
A
716 5SULFATE ION
lig 18
SO4
A
717 5SULFATE ION
lig 19
SO4
A
718 5SULFATE ION
lig 20
ACT
A
719 4ACETATE ION
lig 21
ACT
A
720 4ACETATE ION
lig 22
ACT
A
721 4ACETATE ION
lig 23
ACT
A
722 4ACETATE ION
lig 24
ACT
A
723 4ACETATE ION
lig 25
ACT
A
724 4ACETATE ION
lig 26
ACT
A
725 4ACETATE ION