Analysis of Ligand-Protein Contacts in PDB entry:
6JGK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 31 ligands in PDB entry 6JGK. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GS1
B
1 121-THIO-BETA-D-GLUCOPYRANOSE
lig 2
SGC
B
2 114-THIO-BETA-D-GLUCOPYRANOSE
lig 3
BGC
B
3 10BETA-D-GLUCOPYRANOSE
lig 4
NAG
A
703 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
A
704 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
A
705 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
GOL
A
706 6GLYCEROL
lig 8
GOL
A
707 6GLYCEROL
lig 9
GOL
A
708 6GLYCEROL
lig 10
GOL
A
709 6GLYCEROL
lig 11
GOL
A
710 6GLYCEROL
lig 12
GOL
A
711 6GLYCEROL
lig 13
SO4
A
712 5SULFATE ION
lig 14
SO4
A
713 5SULFATE ION
lig 15
SO4
A
714 5SULFATE ION
lig 16
SO4
A
715 5SULFATE ION
lig 17
1PE
A
716 4PENTAETHYLENE GLYCOL
lig 18
1PE
A
717 5PENTAETHYLENE GLYCOL
lig 19
1PE
A
718 4PENTAETHYLENE GLYCOL
lig 20
1PE
A
719 7PENTAETHYLENE GLYCOL
lig 21
1PE
A
720 5PENTAETHYLENE GLYCOL
lig 22
1PE
A
721 4PENTAETHYLENE GLYCOL
lig 23
1PE
A
722 4PENTAETHYLENE GLYCOL
lig 24
1PE
A
723 10PENTAETHYLENE GLYCOL
lig 25
1PE
A
724 5PENTAETHYLENE GLYCOL
lig 26
1PE
A
725 4PENTAETHYLENE GLYCOL
lig 27
1PE
A
726 8PENTAETHYLENE GLYCOL
lig 28
ACT
A
727 4ACETATE ION
lig 29
ACT
A
728 4ACETATE ION
lig 30
ACT
A
729 4ACETATE ION
lig 31
ACT
A
730 4ACETATE ION