Analysis of Ligand-Protein Contacts in PDB entry:
6JJN


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 6JJN. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
GAL
E
1 12BETA-D-GALACTOPYRANOSE
lig 6
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
GAL
E
3 11BETA-D-GALACTOPYRANOSE
lig 8
SIA
E
4 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 9
FUC
E
5 10ALPHA-L-FUCOPYRANOSE
lig 10
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
GAL
H
1 12BETA-D-GALACTOPYRANOSE
lig 15
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
GAL
H
3 11BETA-D-GALACTOPYRANOSE
lig 17
SIA
H
4 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 18
FUC
H
5 10ALPHA-L-FUCOPYRANOSE
lig 19
NAG
A
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
A
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
SO4
A
612 5SULFATE ION
lig 22
NAG
B
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
B
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
SO4
B
612 5SULFATE ION