Analysis of Ligand-Protein Contacts in PDB entry:
6KD5


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 6KD5. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DKA
C
1 11DECANOIC ACID
lig 2
AR7
C
5 11 DIHYDROXYPENTYL]AMINO}METHANIMINIUM
lig 3
0QE
C
6 1CHLOROMETHANE
lig 4
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
FUC
D
2 10ALPHA-L-FUCOPYRANOSE
lig 6
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
SO4
A
401 5SULFATE ION
lig 9
SO4
A
402 5SULFATE ION
lig 10
SO4
A
403 5SULFATE ION
lig 11
CA
A
404 1CALCIUM ION
lig 12
SO4
B
601 5SULFATE ION
lig 13
SO4
B
602 5SULFATE ION
lig 14
SO4
B
603 5SULFATE ION
lig 15
SO4
C
101 5SULFATE ION