Analysis of Ligand-Protein Contacts in PDB entry:
6M80


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 32 ligands in PDB entry 6M80. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HYP
C
2 84-HYDROXYPROLINE
lig 2
HYP
C
5 84-HYDROXYPROLINE
lig 3
ZPO
C
7 7PYRAZOLIDINE-1-CARBOXYLIC ACID
lig 4
HYP
C
8 84-HYDROXYPROLINE
lig 5
XZA
C
12 4DIAZANECARBOXYLIC ACID
lig 6
HYP
C
14 84-HYDROXYPROLINE
lig 7
HYP
C
17 84-HYDROXYPROLINE
lig 8
HYP
C
20 84-HYDROXYPROLINE
lig 9
HYP
C
23 84-HYDROXYPROLINE
lig 10
NH2
C
25 1AMINO GROUP
lig 11
HYP
D
2 84-HYDROXYPROLINE
lig 12
HYP
D
5 84-HYDROXYPROLINE
lig 13
ZPO
D
7 7PYRAZOLIDINE-1-CARBOXYLIC ACID
lig 14
HYP
D
8 84-HYDROXYPROLINE
lig 15
XZA
D
12 4DIAZANECARBOXYLIC ACID
lig 16
HYP
D
14 84-HYDROXYPROLINE
lig 17
HYP
D
17 84-HYDROXYPROLINE
lig 18
HYP
D
20 84-HYDROXYPROLINE
lig 19
HYP
D
23 84-HYDROXYPROLINE
lig 20
NH2
D
25 1AMINO GROUP
lig 21
HYP
E
2 84-HYDROXYPROLINE
lig 22
HYP
E
5 84-HYDROXYPROLINE
lig 23
ZPO
E
7 7PYRAZOLIDINE-1-CARBOXYLIC ACID
lig 24
HYP
E
8 84-HYDROXYPROLINE
lig 25
XZA
E
12 4DIAZANECARBOXYLIC ACID
lig 26
HYP
E
14 84-HYDROXYPROLINE
lig 27
HYP
E
17 84-HYDROXYPROLINE
lig 28
HYP
E
20 84-HYDROXYPROLINE
lig 29
HYP
E
23 84-HYDROXYPROLINE
lig 30
NH2
E
25 1AMINO GROUP
lig 31
EDO
C
101 41,2-ETHANEDIOL
lig 32
SO4
E
101 5SULFATE ION