Analysis of Ligand-Protein Contacts in PDB entry:
6M87


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 6M87. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PCA
A
1 8PYROGLUTAMIC ACID
lig 2
PCA
C
1 8PYROGLUTAMIC ACID
lig 3
PCA
E
1 8PYROGLUTAMIC ACID
lig 4
PCA
G
1 8PYROGLUTAMIC ACID
lig 5
PCA
I
1 8PYROGLUTAMIC ACID
lig 6
PCA
K
1 8PYROGLUTAMIC ACID
lig 7
PCA
D
1 8PYROGLUTAMIC ACID
lig 8
PCA
J
1 8PYROGLUTAMIC ACID
lig 9
PCA
L
1 8PYROGLUTAMIC ACID
lig 10
2M9
B
301 308-METHOXYPYRENE-1,3,6-TRISULFONIC ACID
lig 11
SO4
B
302 5SULFATE ION
lig 12
2M9
E
301 308-METHOXYPYRENE-1,3,6-TRISULFONIC ACID
lig 13
2M9
G
301 308-METHOXYPYRENE-1,3,6-TRISULFONIC ACID
lig 14
SO4
G
302 5SULFATE ION
lig 15
SO4
I
301 5SULFATE ION
lig 16
2M9
K
301 308-METHOXYPYRENE-1,3,6-TRISULFONIC ACID
lig 17
2M9
D
301 308-METHOXYPYRENE-1,3,6-TRISULFONIC ACID
lig 18
SO4
D
302 5SULFATE ION
lig 19
SO4
F
301 5SULFATE ION
lig 20
2M9
J
301 308-METHOXYPYRENE-1,3,6-TRISULFONIC ACID
lig 21
SO4
L
301 5SULFATE ION